Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 RPS7P12-201ENST00000422385 582 ntBASIC6.72□□□□□ -1.33
SSU72Q9NP77 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 AL645936.2-201ENST00000430565 928 ntBASIC6.72□□□□□ -1.33
SSU72Q9NP77 YWHAEP5-201ENST00000431545 765 ntBASIC6.72□□□□□ -1.33
SSU72Q9NP77 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 AC092170.1-201ENST00000440211 356 ntBASIC6.72□□□□□ -1.33
SSU72Q9NP77 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 AC079776.3-201ENST00000450665 370 ntBASIC6.72□□□□□ -1.33
SSU72Q9NP77 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 AL354872.1-201ENST00000456361 967 ntBASIC6.72□□□□□ -1.33
SSU72Q9NP77 AMD1P1-201ENST00000457220 922 ntBASIC6.72□□□□□ -1.33
SSU72Q9NP77 RPS26P11-201ENST00000463445 348 ntBASIC6.72□□□□□ -1.33
SSU72Q9NP77 AC115223.1-201ENST00000466377 870 ntBASIC6.72□□□□□ -1.33
SSU72Q9NP77 AC079594.1-201ENST00000489757 331 ntBASIC6.72□□□□□ -1.33
SSU72Q9NP77 FCF1P3-201ENST00000496394 590 ntBASIC6.72□□□□□ -1.33
SSU72Q9NP77 RN7SKP244-201ENST00000516513 307 ntBASIC6.72□□□□□ -1.33
SSU72Q9NP77 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 SMARCE1P4-201ENST00000523647 241 ntBASIC6.72□□□□□ -1.33
SSU72Q9NP77 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 AP005639.1-201ENST00000526939 192 ntBASIC6.72□□□□□ -1.33
SSU72Q9NP77 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 AC092747.2-201ENST00000545069 983 ntBASIC6.72□□□□□ -1.33
SSU72Q9NP77 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SSU72Q9NP77 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 CIPC-206ENST00000555611 599 ntTSL 4 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SSU72Q9NP77 AC009063.1-201ENST00000563342 702 ntBASIC6.72□□□□□ -1.33
SSU72Q9NP77 BGLT3-201ENST00000564523 994 ntBASIC6.72□□□□□ -1.33
SSU72Q9NP77 AP003117.2-201ENST00000606010 545 ntBASIC6.72□□□□□ -1.33
SSU72Q9NP77 AP000238.1-201ENST00000608759 426 ntBASIC6.72□□□□□ -1.33
SSU72Q9NP77 AC004241.2-201ENST00000614562 444 ntBASIC6.72□□□□□ -1.33
SSU72Q9NP77 U4.5-201ENST00000617137 123 ntBASIC6.72□□□□□ -1.33
SSU72Q9NP77 AC087821.2-201ENST00000637086 450 ntBASIC6.72□□□□□ -1.33
SSU72Q9NP77 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SSU72Q9NP77 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 AC005539.1-201ENST00000443768 1479 ntBASIC6.72□□□□□ -1.33
SSU72Q9NP77 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SSU72Q9NP77 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SSU72Q9NP77 AL662795.2-201ENST00000624252 3706 ntBASIC6.72□□□□□ -1.33
SSU72Q9NP77 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SSU72Q9NP77 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
SSU72Q9NP77 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SSU72Q9NP77 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
SSU72Q9NP77 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
SSU72Q9NP77 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.33
SSU72Q9NP77 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
SSU72Q9NP77 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC6.71□□□□□ -1.33
SSU72Q9NP77 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
SSU72Q9NP77 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SSU72Q9NP77 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.71□□□□□ -1.34
SSU72Q9NP77 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
SSU72Q9NP77 PWRN1-212ENST00000569908 1435 ntBASIC6.71□□□□□ -1.34
SSU72Q9NP77 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SSU72Q9NP77 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
SSU72Q9NP77 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC6.71□□□□□ -1.34
SSU72Q9NP77 RNU1-46P-201ENST00000384425 164 ntBASIC6.71□□□□□ -1.34
SSU72Q9NP77 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
SSU72Q9NP77 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.71□□□□□ -1.34
SSU72Q9NP77 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
SSU72Q9NP77 HMGB3P18-201ENST00000406327 590 ntBASIC6.71□□□□□ -1.34
SSU72Q9NP77 TYMSP1-201ENST00000407851 869 ntBASIC6.71□□□□□ -1.34
SSU72Q9NP77 IFNA12P-201ENST00000413147 571 ntBASIC6.71□□□□□ -1.34
SSU72Q9NP77 NPM1P4-201ENST00000414095 812 ntBASIC6.71□□□□□ -1.34
SSU72Q9NP77 AL157698.1-201ENST00000415190 1011 ntBASIC6.71□□□□□ -1.34
SSU72Q9NP77 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC6.71□□□□□ -1.34
SSU72Q9NP77 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.71□□□□□ -1.34
SSU72Q9NP77 CYCSP52-201ENST00000422857 310 ntBASIC6.71□□□□□ -1.34
SSU72Q9NP77 GTF2IP23-201ENST00000423746 351 ntBASIC6.71□□□□□ -1.34
SSU72Q9NP77 AC091862.1-201ENST00000438016 1100 ntBASIC6.71□□□□□ -1.34
SSU72Q9NP77 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.71□□□□□ -1.34
SSU72Q9NP77 DNAJC19P4-201ENST00000440115 345 ntBASIC6.71□□□□□ -1.34
SSU72Q9NP77 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC6.71□□□□□ -1.34
SSU72Q9NP77 AC097499.1-201ENST00000444277 208 ntBASIC6.71□□□□□ -1.34
SSU72Q9NP77 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC6.71□□□□□ -1.34
SSU72Q9NP77 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC6.71□□□□□ -1.34
SSU72Q9NP77 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC6.71□□□□□ -1.34
SSU72Q9NP77 AC092001.1-201ENST00000453012 261 ntBASIC6.71□□□□□ -1.34
SSU72Q9NP77 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC6.71□□□□□ -1.34
SSU72Q9NP77 RPS27AP2-201ENST00000457576 465 ntBASIC6.71□□□□□ -1.34
SSU72Q9NP77 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC6.71□□□□□ -1.34
SSU72Q9NP77 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC6.71□□□□□ -1.34
SSU72Q9NP77 AL591122.1-201ENST00000487348 492 ntBASIC6.71□□□□□ -1.34
SSU72Q9NP77 AC074344.1-201ENST00000512823 224 ntBASIC6.71□□□□□ -1.34
SSU72Q9NP77 RNA5SP518-201ENST00000515957 119 ntBASIC6.71□□□□□ -1.34
SSU72Q9NP77 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC6.71□□□□□ -1.34
SSU72Q9NP77 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms