Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 ARL4AP4-201ENST00000434170 518 ntBASIC5.03□□□□□ -1.6
CHD8Q9HCK8 LDHAP2-201ENST00000437325 985 ntBASIC5.03□□□□□ -1.6
CHD8Q9HCK8 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 AC069200.1-201ENST00000609511 323 ntBASIC5.03□□□□□ -1.6
CHD8Q9HCK8 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.03□□□□□ -1.61
CHD8Q9HCK8 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC5.03□□□□□ -1.61
CHD8Q9HCK8 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 AL078621.3-201ENST00000623707 2042 ntBASIC5.02□□□□□ -1.61
CHD8Q9HCK8 CR1-203ENST00000367051 7469 ntTSL 5 BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 CR1-204ENST00000367052 7469 ntTSL 5 BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 CR1-205ENST00000367053 7469 ntTSL 5 BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 AC017079.1-201ENST00000333650 415 ntBASIC5.02□□□□□ -1.61
CHD8Q9HCK8 IGKV7-3-201ENST00000357453 298 ntBASIC5.02□□□□□ -1.61
CHD8Q9HCK8 NUDT19P3-201ENST00000404698 555 ntBASIC5.02□□□□□ -1.61
CHD8Q9HCK8 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 AL592293.2-201ENST00000422292 996 ntBASIC5.02□□□□□ -1.61
CHD8Q9HCK8 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 NPM1P42-201ENST00000560329 862 ntBASIC5.02□□□□□ -1.61
CHD8Q9HCK8 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 AC012254.5-201ENST00000623573 478 ntBASIC5.02□□□□□ -1.61
CHD8Q9HCK8 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 AP002364.1-201ENST00000623330 3386 ntBASIC5.02□□□□□ -1.61
CHD8Q9HCK8 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 AC013488.1-201ENST00000526618 1838 ntBASIC5.02□□□□□ -1.61
CHD8Q9HCK8 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 HMGB3P7-201ENST00000400214 611 ntBASIC5.02□□□□□ -1.61
CHD8Q9HCK8 U3.35-201ENST00000408405 208 ntBASIC5.02□□□□□ -1.61
CHD8Q9HCK8 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 RPL23AP40-201ENST00000487630 390 ntBASIC5.02□□□□□ -1.61
CHD8Q9HCK8 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 AC020915.5-201ENST00000596836 964 ntBASIC5.02□□□□□ -1.61
CHD8Q9HCK8 AC112200.1-201ENST00000625015 234 ntBASIC5.02□□□□□ -1.61
CHD8Q9HCK8 RNA5SP196-201ENST00000625967 102 ntBASIC5.02□□□□□ -1.61
CHD8Q9HCK8 MARK2P15-201ENST00000432204 2186 ntBASIC5.02□□□□□ -1.61
CHD8Q9HCK8 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHD8Q9HCK8 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 AL590240.2-201ENST00000413370 894 ntBASIC5.01□□□□□ -1.61
CHD8Q9HCK8 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 RNA5SP43-201ENST00000516559 110 ntBASIC5.01□□□□□ -1.61
CHD8Q9HCK8 AC023575.1-201ENST00000580510 358 ntBASIC5.01□□□□□ -1.61
CHD8Q9HCK8 AC015818.6-201ENST00000584274 634 ntBASIC5.01□□□□□ -1.61
CHD8Q9HCK8 AC010327.2-201ENST00000587647 488 ntBASIC5.01□□□□□ -1.61
CHD8Q9HCK8 AL513327.3-201ENST00000602618 469 ntBASIC5.01□□□□□ -1.61
CHD8Q9HCK8 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms