Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC007066.1-201ENST00000392902 381 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 SNRPEP2-201ENST00000397592 279 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 AL356057.3-201ENST00000402607 340 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 Y_RNA.605-201ENST00000410577 105 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 FCF1P2-201ENST00000415284 583 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 SETP9-201ENST00000423837 832 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 AC007365.2-201ENST00000428806 458 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 AL365184.2-201ENST00000431139 435 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 DNAJA1P6-201ENST00000437347 354 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 AL451074.3-201ENST00000437709 472 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 GAPDHP58-201ENST00000438477 1006 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 ARL2BPP10-201ENST00000446487 531 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 CECR9-201ENST00000453421 199 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 Z82190.1-201ENST00000454534 490 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 OFD1P4Y-201ENST00000455273 1179 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 AC068228.1-201ENST00000461723 211 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 RPL30P9-201ENST00000465586 330 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 AC087312.1-201ENST00000471411 480 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 RN7SL717P-201ENST00000478343 297 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 TRBV8-1-201ENST00000481590 279 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 RPS3AP14-201ENST00000483907 780 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 AC114981.1-201ENST00000503897 678 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 ATP5LP3-201ENST00000514223 304 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 IGLV2-28-201ENST00000520681 304 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 HSPA8P13-201ENST00000523715 472 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 AC023442.1-201ENST00000531247 422 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 MED21-206ENST00000546323 575 ntTSL 3 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 DNAJC8P1-201ENST00000554535 372 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 PPIAP6-201ENST00000557078 499 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 PCMTD1P2-201ENST00000565017 355 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 AC025678.1-201ENST00000567861 338 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 ALG13-230ENST00000623189 458 ntTSL 3 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 AC005609.2-201ENST00000623320 592 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 NUDT5-207ENST00000491614 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 GOSR2-234ENST00000640138 3408 ntTSL 5 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 CTNNA2-209ENST00000466387 4349 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 TBC1D3P1-DHX40P1-201ENST00000587125 1841 ntTSL 2 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 SEZ6L-204ENST00000402979 3306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 RBFOX1-223ENST00000620507 4018 ntTSL 5 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 AC132825.4-201ENST00000582527 3644 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 ISX-201ENST00000308700 3384 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 PPFIBP1-207ENST00000537927 5719 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 NUP37-209ENST00000552283 2372 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 THBS4-204ENST00000511733 3094 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 RPE-201ENST00000354506 3165 ntTSL 2 BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 SH3YL1-202ENST00000402632 3151 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 UGT2B26P-201ENST00000508672 1613 ntBASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 NDUFV3-201ENST00000340344 4676 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 SNORA4.1-201ENST00000364263 144 ntBASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 RNU6-483P-201ENST00000384088 108 ntBASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 Y_RNA.452-201ENST00000384202 108 ntBASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 RNU6-549P-201ENST00000384433 107 ntBASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 MT-TG-201ENST00000387429 68 ntBASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 RPL12P23-201ENST00000405880 490 ntBASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 RN7SKP127-201ENST00000410443 354 ntBASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 RN7SKP106-201ENST00000410832 272 ntBASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 OR5AW1P-201ENST00000426334 1006 ntBASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 CBX3P6-201ENST00000430257 527 ntBASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 CALM1P1-201ENST00000442082 433 ntBASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 MTND5P22-201ENST00000458380 195 ntBASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 AC093278.1-201ENST00000494700 600 ntBASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms