Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC015688.2-201ENST00000584523 262 ntBASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 GLYATL1P2-202ENST00000588046 902 ntBASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 AC008759.1-201ENST00000589783 983 ntBASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 OR7E18P-201ENST00000592589 702 ntBASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 AC010738.1-201ENST00000604970 987 ntBASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 AP001437.1-201ENST00000608783 456 ntBASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 AC109347.2-201ENST00000610220 349 ntBASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 MIR6085-201ENST00000618314 110 ntBASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 AF246928.1-201ENST00000623768 87 ntBASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 SNORA17.5-201ENST00000630429 132 ntBASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.4□□□□□ -1.23
SYNGAP1Q96PV0 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.4□□□□□ -1.23
SYNGAP1Q96PV0 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
SYNGAP1Q96PV0 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.4□□□□□ -1.23
SYNGAP1Q96PV0 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SYNGAP1Q96PV0 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SYNGAP1Q96PV0 AC111188.2-201ENST00000529697 1387 ntBASIC7.4□□□□□ -1.23
SYNGAP1Q96PV0 EEF1A1P33-201ENST00000554413 1362 ntBASIC7.4□□□□□ -1.23
SYNGAP1Q96PV0 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.4□□□□□ -1.23
SYNGAP1Q96PV0 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.4□□□□□ -1.23
SYNGAP1Q96PV0 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SYNGAP1Q96PV0 NCLP2-201ENST00000416078 1462 ntBASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 AC061975.7-201ENST00000592016 2692 ntBASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 CLCA3P-203ENST00000490028 2781 ntBASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 RNU6-1331P-201ENST00000363658 106 ntBASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 MCTS2P-201ENST00000394552 546 ntBASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 AL627224.1-201ENST00000448334 444 ntBASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 AC234781.3-201ENST00000452540 973 ntBASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 RPL7P32-201ENST00000457119 744 ntBASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 MTND4LP26-201ENST00000518144 282 ntBASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 OR8I1P-201ENST00000529291 931 ntBASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 AC027544.3-201ENST00000535082 757 ntBASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 AC015818.6-201ENST00000584274 634 ntBASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 AL450489.1-201ENST00000612071 468 ntBASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 AL158063.1-201ENST00000615349 536 ntBASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 AL162574.1-201ENST00000615702 950 ntBASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 AC091932.2-201ENST00000623014 291 ntBASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 AC019080.5-201ENST00000624891 757 ntBASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 AP000866.6-201ENST00000638898 3579 ntBASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 CASC19-248ENST00000641674 1356 ntBASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 AL589993.1-201ENST00000407450 2524 ntBASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SYNGAP1Q96PV0 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.38□□□□□ -1.23
SYNGAP1Q96PV0 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNGAP1Q96PV0 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
SYNGAP1Q96PV0 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
SYNGAP1Q96PV0 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SYNGAP1Q96PV0 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNGAP1Q96PV0 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNGAP1Q96PV0 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
SYNGAP1Q96PV0 Y_RNA.3-201ENST00000362331 103 ntBASIC7.38□□□□□ -1.23
SYNGAP1Q96PV0 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNGAP1Q96PV0 MTND4LP20-201ENST00000402379 270 ntBASIC7.38□□□□□ -1.23
SYNGAP1Q96PV0 RPL7P53-201ENST00000421245 739 ntBASIC7.38□□□□□ -1.23
SYNGAP1Q96PV0 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
SYNGAP1Q96PV0 AC007563.3-201ENST00000433233 371 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms