Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AL136228.1-201ENST00000622221 319 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 AC015871.5-202ENST00000623252 701 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
AP1S3Q96PC3 Z95327.2-201ENST00000414579 1873 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
AP1S3Q96PC3 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.06□□□□□ -1.76
AP1S3Q96PC3 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.06□□□□□ -1.76
AP1S3Q96PC3 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.06□□□□□ -1.76
AP1S3Q96PC3 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
AP1S3Q96PC3 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
AP1S3Q96PC3 AC114947.2-201ENST00000565748 2125 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 MT-RNR2-201ENST00000387347 1559 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 PWAR1-201ENST00000624188 2414 ntBASIC4.05□□□□□ -1.76
AP1S3Q96PC3 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 MIR551B-201ENST00000384984 96 ntBASIC4.05□□□□□ -1.76
AP1S3Q96PC3 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.05□□□□□ -1.76
AP1S3Q96PC3 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 FAM183DP-201ENST00000421987 399 ntBASIC4.05□□□□□ -1.76
AP1S3Q96PC3 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 NANOGP4-201ENST00000427230 913 ntBASIC4.05□□□□□ -1.76
AP1S3Q96PC3 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 UBQLN1P1-207ENST00000441056 1169 ntBASIC4.05□□□□□ -1.76
AP1S3Q96PC3 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 AL122020.1-201ENST00000472287 459 ntBASIC4.05□□□□□ -1.76
AP1S3Q96PC3 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 AL158068.1-201ENST00000506116 616 ntBASIC4.05□□□□□ -1.76
AP1S3Q96PC3 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 TCP11X3P-202ENST00000514289 1254 ntBASIC4.05□□□□□ -1.76
AP1S3Q96PC3 AC138938.1-201ENST00000515431 782 ntBASIC4.05□□□□□ -1.76
AP1S3Q96PC3 RN7SKP253-201ENST00000516424 309 ntBASIC4.05□□□□□ -1.76
AP1S3Q96PC3 AC113191.1-201ENST00000517759 403 ntBASIC4.05□□□□□ -1.76
AP1S3Q96PC3 AC139365.2-201ENST00000517972 253 ntBASIC4.05□□□□□ -1.76
AP1S3Q96PC3 CDC42P3-201ENST00000518493 633 ntBASIC4.05□□□□□ -1.76
AP1S3Q96PC3 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 AL358913.1-201ENST00000554342 121 ntBASIC4.05□□□□□ -1.76
AP1S3Q96PC3 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 AC084759.1-201ENST00000561168 290 ntBASIC4.05□□□□□ -1.76
AP1S3Q96PC3 AC096996.1-201ENST00000563813 325 ntBASIC4.05□□□□□ -1.76
AP1S3Q96PC3 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 FAM27E4-201ENST00000605259 342 ntBASIC4.05□□□□□ -1.76
AP1S3Q96PC3 MIR6883-201ENST00000614952 78 ntBASIC4.05□□□□□ -1.76
AP1S3Q96PC3 AC025574.2-201ENST00000615621 514 ntBASIC4.05□□□□□ -1.76
AP1S3Q96PC3 AL121890.2-201ENST00000617644 465 ntBASIC4.05□□□□□ -1.76
AP1S3Q96PC3 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 AC068870.1-201ENST00000563737 2455 ntBASIC4.05□□□□□ -1.76
AP1S3Q96PC3 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 AL450345.1-202ENST00000605741 3881 ntBASIC4.05□□□□□ -1.76
AP1S3Q96PC3 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
AP1S3Q96PC3 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
AP1S3Q96PC3 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
AP1S3Q96PC3 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
AP1S3Q96PC3 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
AP1S3Q96PC3 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
AP1S3Q96PC3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
AP1S3Q96PC3 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.04□□□□□ -1.76
AP1S3Q96PC3 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
AP1S3Q96PC3 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
AP1S3Q96PC3 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.04□□□□□ -1.76
AP1S3Q96PC3 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
AP1S3Q96PC3 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
AP1S3Q96PC3 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
AP1S3Q96PC3 YWHAZP6-201ENST00000399764 738 ntBASIC4.04□□□□□ -1.76
AP1S3Q96PC3 PPIAP9-201ENST00000403866 498 ntBASIC4.04□□□□□ -1.76
AP1S3Q96PC3 RN7SKP146-201ENST00000410242 334 ntBASIC4.04□□□□□ -1.76
AP1S3Q96PC3 AL035422.1-201ENST00000414193 397 ntBASIC4.04□□□□□ -1.76
AP1S3Q96PC3 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC4.04□□□□□ -1.76
AP1S3Q96PC3 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.04□□□□□ -1.76
AP1S3Q96PC3 LINC00328-2P-201ENST00000436585 219 ntBASIC4.04□□□□□ -1.76
AP1S3Q96PC3 AC016772.1-201ENST00000444170 1261 ntBASIC4.04□□□□□ -1.76
AP1S3Q96PC3 AC007383.1-201ENST00000445875 636 ntBASIC4.04□□□□□ -1.76
AP1S3Q96PC3 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.04□□□□□ -1.76
AP1S3Q96PC3 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.04□□□□□ -1.76
AP1S3Q96PC3 RPS6P2-201ENST00000454208 705 ntBASIC4.04□□□□□ -1.76
AP1S3Q96PC3 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.04□□□□□ -1.76
AP1S3Q96PC3 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC4.04□□□□□ -1.76
AP1S3Q96PC3 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.04□□□□□ -1.76
AP1S3Q96PC3 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms