Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AC005294.1-201ENST00000355509 281 ntBASIC5.71□□□□□ -1.5
CCDC42Q96M95 RN7SKP275-201ENST00000364626 301 ntBASIC5.71□□□□□ -1.5
CCDC42Q96M95 SRSF1P1-201ENST00000424058 520 ntBASIC5.71□□□□□ -1.5
CCDC42Q96M95 CDY8P-201ENST00000428380 1279 ntBASIC5.71□□□□□ -1.5
CCDC42Q96M95 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC42Q96M95 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC42Q96M95 AC046176.1-201ENST00000435260 1170 ntBASIC5.71□□□□□ -1.5
CCDC42Q96M95 Z84478.1-201ENST00000438230 1219 ntBASIC5.71□□□□□ -1.5
CCDC42Q96M95 GAPDHP58-201ENST00000438477 1006 ntBASIC5.71□□□□□ -1.5
CCDC42Q96M95 AC019185.1-201ENST00000442718 389 ntBASIC5.71□□□□□ -1.5
CCDC42Q96M95 NOP56P2-201ENST00000447491 769 ntBASIC5.71□□□□□ -1.5
CCDC42Q96M95 CDY20P-201ENST00000447528 1279 ntBASIC5.71□□□□□ -1.5
CCDC42Q96M95 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC42Q96M95 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC42Q96M95 AC058823.1-201ENST00000485315 474 ntBASIC5.71□□□□□ -1.5
CCDC42Q96M95 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC42Q96M95 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC42Q96M95 AC006499.4-201ENST00000510947 694 ntBASIC5.71□□□□□ -1.5
CCDC42Q96M95 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.71□□□□□ -1.5
CCDC42Q96M95 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC42Q96M95 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC42Q96M95 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC42Q96M95 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC42Q96M95 AL162431.4-201ENST00000604674 411 ntBASIC5.71□□□□□ -1.5
CCDC42Q96M95 AC011626.1-201ENST00000604710 562 ntBASIC5.71□□□□□ -1.5
CCDC42Q96M95 AC025262.3-201ENST00000623666 360 ntBASIC5.71□□□□□ -1.5
CCDC42Q96M95 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC42Q96M95 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC42Q96M95 SAMMSON-227ENST00000642114 1199 ntBASIC5.71□□□□□ -1.5
CCDC42Q96M95 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC42Q96M95 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC42Q96M95 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
CCDC42Q96M95 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC42Q96M95 AP005432.1-201ENST00000580891 3485 ntBASIC5.7□□□□□ -1.5
CCDC42Q96M95 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC42Q96M95 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC42Q96M95 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCDC42Q96M95 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC42Q96M95 MIR589-201ENST00000385238 99 ntBASIC5.7□□□□□ -1.5
CCDC42Q96M95 HSPA8P15-201ENST00000401676 786 ntBASIC5.7□□□□□ -1.5
CCDC42Q96M95 SSR1P1-201ENST00000407630 814 ntBASIC5.7□□□□□ -1.5
CCDC42Q96M95 OR2AT2P-201ENST00000413438 905 ntBASIC5.7□□□□□ -1.5
CCDC42Q96M95 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC42Q96M95 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC42Q96M95 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC42Q96M95 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC42Q96M95 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC42Q96M95 AC079168.1-201ENST00000458741 345 ntBASIC5.7□□□□□ -1.5
CCDC42Q96M95 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.7□□□□□ -1.5
CCDC42Q96M95 RN7SL423P-201ENST00000486202 304 ntBASIC5.7□□□□□ -1.5
CCDC42Q96M95 RPL9P15-201ENST00000491096 532 ntBASIC5.7□□□□□ -1.5
CCDC42Q96M95 CYCSP22-201ENST00000517555 339 ntBASIC5.7□□□□□ -1.5
CCDC42Q96M95 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC42Q96M95 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC42Q96M95 AC078878.1-201ENST00000539832 958 ntBASIC5.7□□□□□ -1.5
CCDC42Q96M95 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC42Q96M95 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC42Q96M95 AL049872.1-201ENST00000556323 322 ntBASIC5.7□□□□□ -1.5
CCDC42Q96M95 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC42Q96M95 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC42Q96M95 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC42Q96M95 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC42Q96M95 AC060766.1-201ENST00000590824 627 ntBASIC5.7□□□□□ -1.5
CCDC42Q96M95 AC067773.1-201ENST00000603284 1094 ntBASIC5.7□□□□□ -1.5
CCDC42Q96M95 AC009597.2-201ENST00000604659 592 ntBASIC5.7□□□□□ -1.5
CCDC42Q96M95 AC132068.1-201ENST00000623805 459 ntBASIC5.7□□□□□ -1.5
CCDC42Q96M95 AC073593.1-201ENST00000624500 411 ntBASIC5.7□□□□□ -1.5
CCDC42Q96M95 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CCDC42Q96M95 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC42Q96M95 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC42Q96M95 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC42Q96M95 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC42Q96M95 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CCDC42Q96M95 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC42Q96M95 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.69□□□□□ -1.5
CCDC42Q96M95 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
CCDC42Q96M95 RNA5SP223-201ENST00000365174 120 ntBASIC5.69□□□□□ -1.5
CCDC42Q96M95 Z93019.1-201ENST00000416450 973 ntBASIC5.69□□□□□ -1.5
CCDC42Q96M95 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC42Q96M95 FMO7P-201ENST00000436045 768 ntBASIC5.69□□□□□ -1.5
CCDC42Q96M95 EEF1B2P6-201ENST00000445713 673 ntBASIC5.69□□□□□ -1.5
CCDC42Q96M95 AL161722.1-201ENST00000446972 1032 ntBASIC5.69□□□□□ -1.5
CCDC42Q96M95 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC42Q96M95 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC42Q96M95 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC42Q96M95 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC42Q96M95 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC42Q96M95 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC42Q96M95 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC42Q96M95 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC42Q96M95 AC005252.1-201ENST00000604518 1063 ntBASIC5.69□□□□□ -1.5
CCDC42Q96M95 AC007683.2-201ENST00000624681 714 ntBASIC5.69□□□□□ -1.5
CCDC42Q96M95 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC42Q96M95 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC42Q96M95 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC42Q96M95 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CCDC42Q96M95 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.69□□□□□ -1.5
CCDC42Q96M95 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC42Q96M95 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CCDC42Q96M95 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms