Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RTP4Q96DX8 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
RTP4Q96DX8 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.65□□□□□ -1.5
RTP4Q96DX8 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RTP4Q96DX8 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
RTP4Q96DX8 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
RTP4Q96DX8 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.65□□□□□ -1.5
RTP4Q96DX8 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RTP4Q96DX8 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
RTP4Q96DX8 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RTP4Q96DX8 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RTP4Q96DX8 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RTP4Q96DX8 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.5
RTP4Q96DX8 SNORD56.6-201ENST00000384569 71 ntBASIC5.65□□□□□ -1.5
RTP4Q96DX8 HMGB1P20-201ENST00000402555 677 ntBASIC5.65□□□□□ -1.5
RTP4Q96DX8 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RTP4Q96DX8 LYPLA1P1-201ENST00000434514 622 ntBASIC5.65□□□□□ -1.5
RTP4Q96DX8 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
RTP4Q96DX8 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.65□□□□□ -1.5
RTP4Q96DX8 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.65□□□□□ -1.5
RTP4Q96DX8 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.65□□□□□ -1.5
RTP4Q96DX8 RN7SL629P-201ENST00000489622 285 ntBASIC5.65□□□□□ -1.5
RTP4Q96DX8 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RTP4Q96DX8 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.65□□□□□ -1.5
RTP4Q96DX8 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.65□□□□□ -1.5
RTP4Q96DX8 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.65□□□□□ -1.5
RTP4Q96DX8 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.65□□□□□ -1.5
RTP4Q96DX8 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.5
RTP4Q96DX8 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.65□□□□□ -1.5
RTP4Q96DX8 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RTP4Q96DX8 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.65□□□□□ -1.5
RTP4Q96DX8 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.65□□□□□ -1.5
RTP4Q96DX8 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.65□□□□□ -1.5
RTP4Q96DX8 AL589674.2-201ENST00000604304 337 ntBASIC5.65□□□□□ -1.5
RTP4Q96DX8 AL022394.1-201ENST00000606979 292 ntBASIC5.65□□□□□ -1.5
RTP4Q96DX8 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.65□□□□□ -1.5
RTP4Q96DX8 AC132825.8-201ENST00000640783 297 ntBASIC5.65□□□□□ -1.5
RTP4Q96DX8 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
RTP4Q96DX8 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.65□□□□□ -1.51
RTP4Q96DX8 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RTP4Q96DX8 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.65□□□□□ -1.51
RTP4Q96DX8 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RTP4Q96DX8 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
RTP4Q96DX8 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RTP4Q96DX8 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RTP4Q96DX8 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
RTP4Q96DX8 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
RTP4Q96DX8 CR788268.1-201ENST00000603931 1809 ntBASIC5.64□□□□□ -1.51
RTP4Q96DX8 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.64□□□□□ -1.51
RTP4Q96DX8 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RTP4Q96DX8 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RTP4Q96DX8 SRRM1P3-201ENST00000426911 2678 ntBASIC5.64□□□□□ -1.51
RTP4Q96DX8 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.64□□□□□ -1.51
RTP4Q96DX8 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RTP4Q96DX8 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RTP4Q96DX8 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RTP4Q96DX8 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RTP4Q96DX8 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.64□□□□□ -1.51
RTP4Q96DX8 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RTP4Q96DX8 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.64□□□□□ -1.51
RTP4Q96DX8 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.64□□□□□ -1.51
RTP4Q96DX8 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RTP4Q96DX8 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.64□□□□□ -1.51
RTP4Q96DX8 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RTP4Q96DX8 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.64□□□□□ -1.51
RTP4Q96DX8 SNORA5.1-201ENST00000384275 131 ntBASIC5.64□□□□□ -1.51
RTP4Q96DX8 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.64□□□□□ -1.51
RTP4Q96DX8 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
RTP4Q96DX8 AL391361.1-201ENST00000405580 489 ntBASIC5.64□□□□□ -1.51
RTP4Q96DX8 GAPDHP42-201ENST00000406848 981 ntBASIC5.64□□□□□ -1.51
RTP4Q96DX8 AC079809.1-201ENST00000415468 276 ntBASIC5.64□□□□□ -1.51
RTP4Q96DX8 BX510359.3-201ENST00000422168 306 ntBASIC5.64□□□□□ -1.51
RTP4Q96DX8 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC5.64□□□□□ -1.51
RTP4Q96DX8 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.64□□□□□ -1.51
RTP4Q96DX8 RPL17P35-201ENST00000432217 549 ntBASIC5.64□□□□□ -1.51
RTP4Q96DX8 KATNBL1P2-201ENST00000433311 835 ntBASIC5.64□□□□□ -1.51
RTP4Q96DX8 OR6D1P-201ENST00000436165 939 ntBASIC5.64□□□□□ -1.51
RTP4Q96DX8 AC002504.1-201ENST00000438281 691 ntBASIC5.64□□□□□ -1.51
RTP4Q96DX8 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.64□□□□□ -1.51
RTP4Q96DX8 RPL5P25-201ENST00000441148 775 ntBASIC5.64□□□□□ -1.51
RTP4Q96DX8 AC005297.1-201ENST00000444765 862 ntBASIC5.64□□□□□ -1.51
RTP4Q96DX8 CBX1P2-201ENST00000453841 458 ntBASIC5.64□□□□□ -1.51
RTP4Q96DX8 AP000797.2-201ENST00000475768 606 ntBASIC5.64□□□□□ -1.51
RTP4Q96DX8 PPP1R11P1-201ENST00000486095 376 ntBASIC5.64□□□□□ -1.51
RTP4Q96DX8 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.64□□□□□ -1.51
RTP4Q96DX8 SCARNA20.4-201ENST00000516969 131 ntBASIC5.64□□□□□ -1.51
RTP4Q96DX8 AC027308.1-201ENST00000517993 110 ntBASIC5.64□□□□□ -1.51
RTP4Q96DX8 MTND1P6-201ENST00000523621 946 ntBASIC5.64□□□□□ -1.51
RTP4Q96DX8 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.64□□□□□ -1.51
RTP4Q96DX8 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.64□□□□□ -1.51
RTP4Q96DX8 IGBP1P1-201ENST00000554337 1009 ntBASIC5.64□□□□□ -1.51
RTP4Q96DX8 OR11H3P-201ENST00000554547 982 ntBASIC5.64□□□□□ -1.51
RTP4Q96DX8 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RTP4Q96DX8 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.64□□□□□ -1.51
RTP4Q96DX8 AC234775.3-201ENST00000564612 656 ntBASIC5.64□□□□□ -1.51
RTP4Q96DX8 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.64□□□□□ -1.51
RTP4Q96DX8 MTND2P13-201ENST00000577438 1039 ntBASIC5.64□□□□□ -1.51
RTP4Q96DX8 MIR4489-201ENST00000578869 62 ntBASIC5.64□□□□□ -1.51
RTP4Q96DX8 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.64□□□□□ -1.51
RTP4Q96DX8 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms