Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 DHRS9-201ENST00000357546 1917 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
HLA-CQ95604 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
HLA-CQ95604 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
HLA-CQ95604 FCGR3B-202ENST00000367964 2143 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
HLA-CQ95604 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
HLA-CQ95604 FPR3-202ENST00000595991 2222 ntAPPRIS P1 TSL 4 BASIC7.91□□□□□ -1.14
HLA-CQ95604 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.91□□□□□ -1.14
HLA-CQ95604 AC008985.1-201ENST00000624169 2239 ntBASIC7.91□□□□□ -1.14
HLA-CQ95604 AC073525.1-203ENST00000547040 2631 ntTSL 2 BASIC7.91□□□□□ -1.14
HLA-CQ95604 CAV1-201ENST00000341049 2704 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
HLA-CQ95604 AZIN1-202ENST00000347770 2857 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
HLA-CQ95604 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
HLA-CQ95604 MCTP1-202ENST00000429576 3159 ntAPPRIS ALT2 TSL 2 BASIC7.91□□□□□ -1.14
HLA-CQ95604 OTOA-201ENST00000286149 3471 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
HLA-CQ95604 SORL1-211ENST00000532694 3692 ntTSL 2 BASIC7.91□□□□□ -1.14
HLA-CQ95604 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
HLA-CQ95604 ERG-206ENST00000398911 4914 ntTSL 5 BASIC7.91□□□□□ -1.14
HLA-CQ95604 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
HLA-CQ95604 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
HLA-CQ95604 MTHFD1L-212ENST00000618312 3159 ntTSL 5 BASIC7.9□□□□□ -1.14
HLA-CQ95604 PLA2G4A-201ENST00000367466 2875 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
HLA-CQ95604 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
HLA-CQ95604 SRPK2-214ENST00000489828 2560 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
HLA-CQ95604 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
HLA-CQ95604 SAMMSON-203ENST00000641005 2168 ntBASIC7.9□□□□□ -1.14
HLA-CQ95604 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
HLA-CQ95604 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
HLA-CQ95604 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
HLA-CQ95604 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.14
HLA-CQ95604 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC7.9□□□□□ -1.14
HLA-CQ95604 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.9□□□□□ -1.14
HLA-CQ95604 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
HLA-CQ95604 OR5P1P-201ENST00000299512 925 ntBASIC7.9□□□□□ -1.14
HLA-CQ95604 GAPDHP24-201ENST00000328713 983 ntBASIC7.9□□□□□ -1.14
HLA-CQ95604 RNA5SP114-201ENST00000363780 113 ntBASIC7.9□□□□□ -1.14
HLA-CQ95604 Y_RNA.202-201ENST00000364083 110 ntBASIC7.9□□□□□ -1.14
HLA-CQ95604 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.14
HLA-CQ95604 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
HLA-CQ95604 MIR506-201ENST00000384998 124 ntBASIC7.9□□□□□ -1.14
HLA-CQ95604 FAUP2-201ENST00000394301 401 ntBASIC7.9□□□□□ -1.14
HLA-CQ95604 U3.31-201ENST00000408113 216 ntBASIC7.9□□□□□ -1.14
HLA-CQ95604 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC7.9□□□□□ -1.14
HLA-CQ95604 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC7.9□□□□□ -1.14
HLA-CQ95604 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC7.9□□□□□ -1.14
HLA-CQ95604 AL161631.1-201ENST00000417933 486 ntBASIC7.9□□□□□ -1.14
HLA-CQ95604 AC114814.2-201ENST00000419195 485 ntBASIC7.9□□□□□ -1.14
HLA-CQ95604 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC7.9□□□□□ -1.14
HLA-CQ95604 RPL35AP12-201ENST00000425362 338 ntBASIC7.9□□□□□ -1.14
HLA-CQ95604 PCBP2P1-201ENST00000437262 977 ntBASIC7.9□□□□□ -1.14
HLA-CQ95604 AL034369.1-201ENST00000453808 477 ntBASIC7.9□□□□□ -1.14
HLA-CQ95604 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.9□□□□□ -1.14
HLA-CQ95604 TRBV8-2-201ENST00000475637 270 ntBASIC7.9□□□□□ -1.14
HLA-CQ95604 AC114324.2-202ENST00000503812 134 ntBASIC7.9□□□□□ -1.14
HLA-CQ95604 MTND4LP22-201ENST00000508209 276 ntBASIC7.9□□□□□ -1.14
HLA-CQ95604 NACAP6-201ENST00000509572 622 ntBASIC7.9□□□□□ -1.14
HLA-CQ95604 RN7SKP13-201ENST00000515933 244 ntBASIC7.9□□□□□ -1.14
HLA-CQ95604 RN7SKP116-201ENST00000516902 319 ntBASIC7.9□□□□□ -1.14
HLA-CQ95604 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC7.9□□□□□ -1.14
HLA-CQ95604 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC7.9□□□□□ -1.14
HLA-CQ95604 RGS4-207ENST00000527809 817 ntTSL 4 BASIC7.9□□□□□ -1.14
HLA-CQ95604 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC7.9□□□□□ -1.14
HLA-CQ95604 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC7.9□□□□□ -1.14
HLA-CQ95604 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC7.9□□□□□ -1.14
HLA-CQ95604 IGHV1OR15-3-201ENST00000564926 351 ntBASIC7.9□□□□□ -1.14
HLA-CQ95604 AC093249.1-201ENST00000567049 203 ntBASIC7.9□□□□□ -1.14
HLA-CQ95604 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC7.9□□□□□ -1.14
HLA-CQ95604 PPIAP14-201ENST00000577627 496 ntBASIC7.9□□□□□ -1.14
HLA-CQ95604 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC7.9□□□□□ -1.14
HLA-CQ95604 DISC2.1-201ENST00000612827 205 ntBASIC7.9□□□□□ -1.14
HLA-CQ95604 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
HLA-CQ95604 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
HLA-CQ95604 AC005753.1-201ENST00000623837 618 ntBASIC7.9□□□□□ -1.14
HLA-CQ95604 AC022743.1-201ENST00000624990 664 ntBASIC7.9□□□□□ -1.14
HLA-CQ95604 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.14
HLA-CQ95604 AC233280.20-201ENST00000637412 416 ntBASIC7.9□□□□□ -1.14
HLA-CQ95604 AL596275.2-203ENST00000641951 371 ntBASIC7.9□□□□□ -1.14
HLA-CQ95604 HPS4-203ENST00000402105 3562 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
HLA-CQ95604 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
HLA-CQ95604 CASP14-201ENST00000427043 3241 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
HLA-CQ95604 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
HLA-CQ95604 C2-201ENST00000299367 2850 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
HLA-CQ95604 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
HLA-CQ95604 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
HLA-CQ95604 CD36-209ENST00000435819 2365 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.15
HLA-CQ95604 JAZF1-AS1-202ENST00000444500 3684 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
HLA-CQ95604 AC124319.2-201ENST00000575034 3651 ntTSL 2 BASIC7.9□□□□□ -1.15
HLA-CQ95604 RBM46-202ENST00000510397 3626 ntTSL 2 BASIC7.9□□□□□ -1.15
HLA-CQ95604 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC7.9□□□□□ -1.15
HLA-CQ95604 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
HLA-CQ95604 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
HLA-CQ95604 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
HLA-CQ95604 ZKSCAN8-202ENST00000457389 2071 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
HLA-CQ95604 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
HLA-CQ95604 AHCYL2-208ENST00000474594 2047 ntTSL 2 BASIC7.9□□□□□ -1.15
HLA-CQ95604 AL354993.1-201ENST00000436286 3280 ntTSL 4 BASIC7.9□□□□□ -1.15
HLA-CQ95604 SCMH1-205ENST00000372595 3231 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
HLA-CQ95604 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
HLA-CQ95604 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC7.89□□□□□ -1.15
HLA-CQ95604 MAGEC1-201ENST00000285879 4270 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
HLA-CQ95604 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms