Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 RNA5SP510-201ENST00000364697 99 ntBASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 RNU6-673P-201ENST00000365084 104 ntBASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 RNA5SP284-201ENST00000384547 118 ntBASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 AL121878.1-201ENST00000418638 859 ntBASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 AC093155.2-201ENST00000420734 937 ntBASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 IPPKP1-201ENST00000422501 768 ntBASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 AL662874.1-201ENST00000426065 230 ntBASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 BX119321.1-201ENST00000428912 797 ntBASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 AC090018.1-201ENST00000434369 367 ntBASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 AL161722.1-201ENST00000446972 1032 ntBASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 RN7SL72P-201ENST00000460697 269 ntBASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 AC021660.1-201ENST00000465006 554 ntBASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 AC007998.1-201ENST00000474156 672 ntBASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 RN7SL583P-201ENST00000475692 287 ntBASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 RPS12P31-201ENST00000491419 398 ntBASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 AC109481.1-201ENST00000509173 282 ntBASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 SNORD46.2-201ENST00000516021 102 ntBASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 AC027369.5-201ENST00000533838 755 ntBASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RTN4IP1Q8WWV3 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 LINC01963-201ENST00000562038 3148 ntBASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 RNA5SP46-201ENST00000362370 120 ntBASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 GAPDHP42-201ENST00000406848 981 ntBASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 MIR1282-201ENST00000408865 101 ntBASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 RPL12P9-201ENST00000412942 488 ntBASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 GNG5P5-201ENST00000420444 220 ntBASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 Z84478.1-201ENST00000438230 1219 ntBASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 AL450996.1-201ENST00000445574 1202 ntBASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 RPS24P16-201ENST00000497294 392 ntBASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 PSMA2P2-201ENST00000504319 686 ntBASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 AC006349.1-201ENST00000555526 235 ntBASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 AC025574.2-201ENST00000615621 514 ntBASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 SAMMSON-227ENST00000642114 1199 ntBASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 AC079298.1-201ENST00000625026 1619 ntBASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 AC114786.1-201ENST00000512892 1415 ntBASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
RTN4IP1Q8WWV3 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms