Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4□□□□□ -1.77
NUP35Q8NFH5 AC138517.1-201ENST00000515724 568 ntBASIC4□□□□□ -1.77
NUP35Q8NFH5 AC105031.1-201ENST00000518550 476 ntBASIC4□□□□□ -1.77
NUP35Q8NFH5 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4□□□□□ -1.77
NUP35Q8NFH5 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC4□□□□□ -1.77
NUP35Q8NFH5 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4□□□□□ -1.77
NUP35Q8NFH5 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4□□□□□ -1.77
NUP35Q8NFH5 AC006530.1-201ENST00000555980 571 ntBASIC4□□□□□ -1.77
NUP35Q8NFH5 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4□□□□□ -1.77
NUP35Q8NFH5 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4□□□□□ -1.77
NUP35Q8NFH5 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
NUP35Q8NFH5 MIR4776-2-201ENST00000580204 80 ntBASIC4□□□□□ -1.77
NUP35Q8NFH5 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC4□□□□□ -1.77
NUP35Q8NFH5 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4□□□□□ -1.77
NUP35Q8NFH5 AL008729.2-201ENST00000606393 473 ntBASIC4□□□□□ -1.77
NUP35Q8NFH5 MIR6809-201ENST00000612189 116 ntBASIC4□□□□□ -1.77
NUP35Q8NFH5 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
NUP35Q8NFH5 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4□□□□□ -1.77
NUP35Q8NFH5 AC109583.2-201ENST00000617367 129 ntBASIC4□□□□□ -1.77
NUP35Q8NFH5 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4□□□□□ -1.77
NUP35Q8NFH5 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4□□□□□ -1.77
NUP35Q8NFH5 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4□□□□□ -1.77
NUP35Q8NFH5 AP003400.3-201ENST00000624904 346 ntBASIC4□□□□□ -1.77
NUP35Q8NFH5 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
NUP35Q8NFH5 RBPJP2-201ENST00000618187 1444 ntBASIC4□□□□□ -1.77
NUP35Q8NFH5 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NUP35Q8NFH5 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
NUP35Q8NFH5 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC4□□□□□ -1.77
NUP35Q8NFH5 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4□□□□□ -1.77
NUP35Q8NFH5 AL606537.1-201ENST00000607258 2011 ntBASIC4□□□□□ -1.77
NUP35Q8NFH5 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4□□□□□ -1.77
NUP35Q8NFH5 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NUP35Q8NFH5 PDZK1P1-202ENST00000425209 1350 ntBASIC4□□□□□ -1.77
NUP35Q8NFH5 CASC19-221ENST00000641309 1382 ntBASIC4□□□□□ -1.77
NUP35Q8NFH5 CASC19-255ENST00000641733 1385 ntBASIC4□□□□□ -1.77
NUP35Q8NFH5 QRSL1P1-201ENST00000400977 1540 ntBASIC4□□□□□ -1.77
NUP35Q8NFH5 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4□□□□□ -1.77
NUP35Q8NFH5 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
NUP35Q8NFH5 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
NUP35Q8NFH5 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 AL162456.1-201ENST00000634535 2006 ntBASIC3.99□□□□□ -1.77
NUP35Q8NFH5 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 PSMA6P1-201ENST00000400275 741 ntBASIC3.99□□□□□ -1.77
NUP35Q8NFH5 AL133260.1-201ENST00000405720 405 ntBASIC3.99□□□□□ -1.77
NUP35Q8NFH5 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 AC006335.2-201ENST00000437993 330 ntBASIC3.99□□□□□ -1.77
NUP35Q8NFH5 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 RPL7L1P1-201ENST00000448259 785 ntBASIC3.99□□□□□ -1.77
NUP35Q8NFH5 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 AC239798.3-201ENST00000454459 408 ntBASIC3.99□□□□□ -1.77
NUP35Q8NFH5 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 H3F3AP5-201ENST00000475267 429 ntBASIC3.99□□□□□ -1.77
NUP35Q8NFH5 AC008410.1-201ENST00000483777 339 ntBASIC3.99□□□□□ -1.77
NUP35Q8NFH5 RN7SL814P-201ENST00000487715 300 ntBASIC3.99□□□□□ -1.77
NUP35Q8NFH5 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 AC011411.1-201ENST00000509592 876 ntBASIC3.99□□□□□ -1.77
NUP35Q8NFH5 BTG4P1-201ENST00000510421 183 ntBASIC3.99□□□□□ -1.77
NUP35Q8NFH5 AC109464.1-201ENST00000511091 819 ntBASIC3.99□□□□□ -1.77
NUP35Q8NFH5 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 RN7SKP46-201ENST00000515942 234 ntBASIC3.99□□□□□ -1.77
NUP35Q8NFH5 RNU2-45P-201ENST00000516068 187 ntBASIC3.99□□□□□ -1.77
NUP35Q8NFH5 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 MIR4675-201ENST00000577898 77 ntBASIC3.99□□□□□ -1.77
NUP35Q8NFH5 CCDC58P1-201ENST00000578567 430 ntBASIC3.99□□□□□ -1.77
NUP35Q8NFH5 AP005403.1-201ENST00000579720 229 ntBASIC3.99□□□□□ -1.77
NUP35Q8NFH5 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 AC012368.3-201ENST00000604190 219 ntBASIC3.99□□□□□ -1.77
NUP35Q8NFH5 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 AP005431.1-201ENST00000618479 319 ntBASIC3.99□□□□□ -1.77
NUP35Q8NFH5 AC022919.1-201ENST00000624979 626 ntBASIC3.99□□□□□ -1.77
NUP35Q8NFH5 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
NUP35Q8NFH5 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
NUP35Q8NFH5 NAMPTP1-201ENST00000440465 2514 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms