Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 RNA5SP223-201ENST00000365174 120 ntBASIC5.16□□□□□ -1.58
C11orf88Q6PI97 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 MIR188-201ENST00000385034 86 ntBASIC5.16□□□□□ -1.58
C11orf88Q6PI97 CCNB2P1-201ENST00000399411 1150 ntBASIC5.16□□□□□ -1.58
C11orf88Q6PI97 AC211486.3-201ENST00000412694 621 ntBASIC5.16□□□□□ -1.58
C11orf88Q6PI97 METTL15P3-201ENST00000415522 1221 ntBASIC5.16□□□□□ -1.58
C11orf88Q6PI97 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 MTCO3P21-201ENST00000430791 643 ntBASIC5.16□□□□□ -1.58
C11orf88Q6PI97 GTF3AP6-201ENST00000432585 986 ntBASIC5.16□□□□□ -1.58
C11orf88Q6PI97 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.16□□□□□ -1.58
C11orf88Q6PI97 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 OR2L9P-201ENST00000444456 913 ntBASIC5.16□□□□□ -1.58
C11orf88Q6PI97 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 RPL23AP60-201ENST00000450011 454 ntBASIC5.16□□□□□ -1.58
C11orf88Q6PI97 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 AC073594.1-201ENST00000462065 364 ntBASIC5.16□□□□□ -1.58
C11orf88Q6PI97 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 AC021006.1-201ENST00000489849 553 ntBASIC5.16□□□□□ -1.58
C11orf88Q6PI97 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 RPL37P23-201ENST00000492641 294 ntBASIC5.16□□□□□ -1.58
C11orf88Q6PI97 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 AC018797.1-201ENST00000510791 255 ntBASIC5.16□□□□□ -1.58
C11orf88Q6PI97 AC108120.2-201ENST00000512973 294 ntBASIC5.16□□□□□ -1.58
C11orf88Q6PI97 AC084121.1-201ENST00000533882 835 ntBASIC5.16□□□□□ -1.58
C11orf88Q6PI97 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 AL163952.1-202ENST00000569625 600 ntBASIC5.16□□□□□ -1.58
C11orf88Q6PI97 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 AC020916.2-201ENST00000591242 360 ntBASIC5.16□□□□□ -1.58
C11orf88Q6PI97 DYNLL1P1-201ENST00000595442 269 ntBASIC5.16□□□□□ -1.58
C11orf88Q6PI97 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 AL589765.6-201ENST00000601909 549 ntBASIC5.16□□□□□ -1.58
C11orf88Q6PI97 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 AC012467.1-201ENST00000607740 256 ntBASIC5.16□□□□□ -1.58
C11orf88Q6PI97 CR589904.2-201ENST00000612533 440 ntBASIC5.16□□□□□ -1.58
C11orf88Q6PI97 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 LINC02495-203ENST00000636704 242 ntBASIC5.16□□□□□ -1.58
C11orf88Q6PI97 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 MFSD8-239ENST00000641590 2479 ntBASIC5.16□□□□□ -1.58
C11orf88Q6PI97 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 AL360270.2-201ENST00000562952 5985 ntBASIC5.16□□□□□ -1.58
C11orf88Q6PI97 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.15□□□□□ -1.58
C11orf88Q6PI97 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.15□□□□□ -1.58
C11orf88Q6PI97 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.15□□□□□ -1.58
C11orf88Q6PI97 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.15□□□□□ -1.58
C11orf88Q6PI97 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
C11orf88Q6PI97 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
C11orf88Q6PI97 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.15□□□□□ -1.58
C11orf88Q6PI97 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
C11orf88Q6PI97 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
C11orf88Q6PI97 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
C11orf88Q6PI97 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
C11orf88Q6PI97 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
C11orf88Q6PI97 AC011155.1-201ENST00000316512 456 ntBASIC5.15□□□□□ -1.59
C11orf88Q6PI97 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
C11orf88Q6PI97 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
C11orf88Q6PI97 SNORD35A-201ENST00000363389 86 ntBASIC5.15□□□□□ -1.59
C11orf88Q6PI97 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.15□□□□□ -1.59
C11orf88Q6PI97 RNU6-883P-201ENST00000384597 107 ntBASIC5.15□□□□□ -1.59
C11orf88Q6PI97 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.15□□□□□ -1.59
C11orf88Q6PI97 MIR1282-201ENST00000408865 101 ntBASIC5.15□□□□□ -1.59
C11orf88Q6PI97 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.15□□□□□ -1.59
C11orf88Q6PI97 VN1R20P-201ENST00000425215 966 ntBASIC5.15□□□□□ -1.59
C11orf88Q6PI97 AL354707.3-201ENST00000427308 331 ntBASIC5.15□□□□□ -1.59
C11orf88Q6PI97 RPS27AP6-201ENST00000427962 448 ntBASIC5.15□□□□□ -1.59
C11orf88Q6PI97 MTND4LP14-201ENST00000429447 288 ntBASIC5.15□□□□□ -1.59
C11orf88Q6PI97 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.15□□□□□ -1.59
C11orf88Q6PI97 MED28P4-201ENST00000433137 572 ntBASIC5.15□□□□□ -1.59
C11orf88Q6PI97 AC138761.5-201ENST00000433967 325 ntBASIC5.15□□□□□ -1.59
C11orf88Q6PI97 AC099670.2-201ENST00000435130 321 ntBASIC5.15□□□□□ -1.59
C11orf88Q6PI97 RPS10P18-201ENST00000442662 495 ntBASIC5.15□□□□□ -1.59
C11orf88Q6PI97 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.15□□□□□ -1.59
C11orf88Q6PI97 AL162739.1-201ENST00000450606 307 ntBASIC5.15□□□□□ -1.59
C11orf88Q6PI97 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.15□□□□□ -1.59
C11orf88Q6PI97 AC009963.3-201ENST00000458090 486 ntBASIC5.15□□□□□ -1.59
C11orf88Q6PI97 AC107398.1-201ENST00000486904 505 ntBASIC5.15□□□□□ -1.59
C11orf88Q6PI97 RPL23AP40-201ENST00000487630 390 ntBASIC5.15□□□□□ -1.59
C11orf88Q6PI97 AC112484.3-201ENST00000505910 329 ntBASIC5.15□□□□□ -1.59
C11orf88Q6PI97 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.15□□□□□ -1.59
C11orf88Q6PI97 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.15□□□□□ -1.59
C11orf88Q6PI97 TPM3P3-201ENST00000521343 354 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms