Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
LTBQ06643 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.32□□□□□ -1.56
LTBQ06643 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.32□□□□□ -1.56
LTBQ06643 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LTBQ06643 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LTBQ06643 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
LTBQ06643 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LTBQ06643 AC012254.3-201ENST00000591183 2117 ntBASIC5.32□□□□□ -1.56
LTBQ06643 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.32□□□□□ -1.56
LTBQ06643 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
LTBQ06643 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
LTBQ06643 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LTBQ06643 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.32□□□□□ -1.56
LTBQ06643 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LTBQ06643 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
LTBQ06643 RNFT1P3-201ENST00000340898 1052 ntBASIC5.32□□□□□ -1.56
LTBQ06643 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LTBQ06643 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
LTBQ06643 AF228730.1-201ENST00000397972 663 ntBASIC5.32□□□□□ -1.56
LTBQ06643 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LTBQ06643 SPTLC1P2-201ENST00000407089 121 ntBASIC5.32□□□□□ -1.56
LTBQ06643 AC069282.1-201ENST00000411911 526 ntBASIC5.32□□□□□ -1.56
LTBQ06643 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.32□□□□□ -1.56
LTBQ06643 SDHDP6-201ENST00000414693 480 ntBASIC5.32□□□□□ -1.56
LTBQ06643 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.32□□□□□ -1.56
LTBQ06643 AC019205.1-201ENST00000421830 730 ntBASIC5.32□□□□□ -1.56
LTBQ06643 AC092447.3-201ENST00000426027 686 ntBASIC5.32□□□□□ -1.56
LTBQ06643 AC114973.1-201ENST00000429057 632 ntBASIC5.32□□□□□ -1.56
LTBQ06643 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.32□□□□□ -1.56
LTBQ06643 MRPL50P1-201ENST00000431951 384 ntBASIC5.32□□□□□ -1.56
LTBQ06643 NPM1P48-201ENST00000436002 853 ntBASIC5.32□□□□□ -1.56
LTBQ06643 AC064862.4-201ENST00000442180 334 ntBASIC5.32□□□□□ -1.56
LTBQ06643 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.32□□□□□ -1.56
LTBQ06643 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.32□□□□□ -1.56
LTBQ06643 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.32□□□□□ -1.56
LTBQ06643 RSU1P1-201ENST00000453416 441 ntBASIC5.32□□□□□ -1.56
LTBQ06643 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.32□□□□□ -1.56
LTBQ06643 UBFD1P1-201ENST00000473259 814 ntBASIC5.32□□□□□ -1.56
LTBQ06643 RPS3AP15-201ENST00000483874 781 ntBASIC5.32□□□□□ -1.56
LTBQ06643 AC105233.1-201ENST00000498840 781 ntBASIC5.32□□□□□ -1.56
LTBQ06643 OR5M14P-201ENST00000506803 618 ntBASIC5.32□□□□□ -1.56
LTBQ06643 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.32□□□□□ -1.56
LTBQ06643 Y_RNA.667-201ENST00000516212 107 ntBASIC5.32□□□□□ -1.56
LTBQ06643 AC136777.2-201ENST00000522979 358 ntBASIC5.32□□□□□ -1.56
LTBQ06643 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.32□□□□□ -1.56
LTBQ06643 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.32□□□□□ -1.56
LTBQ06643 EIF4A2P5-201ENST00000529914 499 ntBASIC5.32□□□□□ -1.56
LTBQ06643 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.32□□□□□ -1.56
LTBQ06643 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LTBQ06643 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.32□□□□□ -1.56
LTBQ06643 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.32□□□□□ -1.56
LTBQ06643 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.32□□□□□ -1.56
LTBQ06643 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.32□□□□□ -1.56
LTBQ06643 AC107993.1-201ENST00000591343 684 ntBASIC5.32□□□□□ -1.56
LTBQ06643 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LTBQ06643 AC006115.2-201ENST00000596823 202 ntBASIC5.32□□□□□ -1.56
LTBQ06643 RNA5SP440-201ENST00000612665 119 ntBASIC5.32□□□□□ -1.56
LTBQ06643 AC245014.3-201ENST00000618589 347 ntBASIC5.32□□□□□ -1.56
LTBQ06643 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.32□□□□□ -1.56
LTBQ06643 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.32□□□□□ -1.56
LTBQ06643 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LTBQ06643 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LTBQ06643 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.32□□□□□ -1.56
LTBQ06643 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.32□□□□□ -1.56
LTBQ06643 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LTBQ06643 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
LTBQ06643 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LTBQ06643 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LTBQ06643 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LTBQ06643 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
LTBQ06643 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.32□□□□□ -1.56
LTBQ06643 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.32□□□□□ -1.56
LTBQ06643 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.31□□□□□ -1.56
LTBQ06643 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LTBQ06643 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LTBQ06643 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LTBQ06643 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
LTBQ06643 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LTBQ06643 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.31□□□□□ -1.56
LTBQ06643 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
LTBQ06643 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LTBQ06643 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LTBQ06643 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.31□□□□□ -1.56
LTBQ06643 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
LTBQ06643 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
LTBQ06643 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
LTBQ06643 RNA5SP273-201ENST00000362484 113 ntBASIC5.31□□□□□ -1.56
LTBQ06643 RN7SKP128-201ENST00000364270 303 ntBASIC5.31□□□□□ -1.56
LTBQ06643 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
LTBQ06643 MIR585-201ENST00000384887 94 ntBASIC5.31□□□□□ -1.56
LTBQ06643 CCNB2P1-201ENST00000399411 1150 ntBASIC5.31□□□□□ -1.56
LTBQ06643 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.31□□□□□ -1.56
LTBQ06643 AP000534.2-201ENST00000412729 568 ntBASIC5.31□□□□□ -1.56
LTBQ06643 OR2AT2P-201ENST00000413438 905 ntBASIC5.31□□□□□ -1.56
LTBQ06643 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.31□□□□□ -1.56
LTBQ06643 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.31□□□□□ -1.56
LTBQ06643 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.31□□□□□ -1.56
LTBQ06643 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
LTBQ06643 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.31□□□□□ -1.56
LTBQ06643 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms