Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 FANCD2P2-201ENST00000437591 1400 ntBASIC5.51□□□□□ -1.53
CBX1P83916 TTC39DP-201ENST00000416781 1688 ntBASIC5.51□□□□□ -1.53
CBX1P83916 TLK1P1-201ENST00000456760 2440 ntBASIC5.51□□□□□ -1.53
CBX1P83916 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CBX1P83916 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CBX1P83916 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CBX1P83916 MIR431-201ENST00000385266 114 ntBASIC5.51□□□□□ -1.53
CBX1P83916 RN7SKP144-201ENST00000411108 279 ntBASIC5.51□□□□□ -1.53
CBX1P83916 RNA5SP155-201ENST00000411154 129 ntBASIC5.51□□□□□ -1.53
CBX1P83916 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC5.51□□□□□ -1.53
CBX1P83916 MTND4LP21-201ENST00000415303 295 ntBASIC5.51□□□□□ -1.53
CBX1P83916 MEAF6P1-201ENST00000416092 327 ntBASIC5.51□□□□□ -1.53
CBX1P83916 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.51□□□□□ -1.53
CBX1P83916 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.51□□□□□ -1.53
CBX1P83916 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.51□□□□□ -1.53
CBX1P83916 CXCR2P1-202ENST00000443392 1074 ntBASIC5.51□□□□□ -1.53
CBX1P83916 RPL36AP55-201ENST00000454114 305 ntBASIC5.51□□□□□ -1.53
CBX1P83916 RN7SL372P-201ENST00000461982 298 ntBASIC5.51□□□□□ -1.53
CBX1P83916 TRBV8-1-201ENST00000481590 279 ntBASIC5.51□□□□□ -1.53
CBX1P83916 NIP7P2-201ENST00000485801 544 ntBASIC5.51□□□□□ -1.53
CBX1P83916 RN7SL104P-201ENST00000498686 293 ntBASIC5.51□□□□□ -1.53
CBX1P83916 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.51□□□□□ -1.53
CBX1P83916 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC5.51□□□□□ -1.53
CBX1P83916 AP001000.1-201ENST00000526843 742 ntBASIC5.51□□□□□ -1.53
CBX1P83916 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
CBX1P83916 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.51□□□□□ -1.53
CBX1P83916 GLRXP2-201ENST00000555594 321 ntBASIC5.51□□□□□ -1.53
CBX1P83916 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.51□□□□□ -1.53
CBX1P83916 MIR3157-201ENST00000578688 85 ntBASIC5.51□□□□□ -1.53
CBX1P83916 AC026898.1-201ENST00000586404 571 ntBASIC5.51□□□□□ -1.53
CBX1P83916 AP001823.1-201ENST00000604056 1003 ntBASIC5.51□□□□□ -1.53
CBX1P83916 AL078624.2-201ENST00000605063 554 ntBASIC5.51□□□□□ -1.53
CBX1P83916 AC026979.4-201ENST00000606555 645 ntBASIC5.51□□□□□ -1.53
CBX1P83916 AL137246.1-201ENST00000607072 977 ntBASIC5.51□□□□□ -1.53
CBX1P83916 AC097505.1-201ENST00000610199 565 ntBASIC5.51□□□□□ -1.53
CBX1P83916 AL139099.4-201ENST00000614802 114 ntBASIC5.51□□□□□ -1.53
CBX1P83916 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CBX1P83916 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC5.51□□□□□ -1.53
CBX1P83916 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.51□□□□□ -1.53
CBX1P83916 AC091059.2-201ENST00000623355 614 ntBASIC5.51□□□□□ -1.53
CBX1P83916 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.51□□□□□ -1.53
CBX1P83916 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.51□□□□□ -1.53
CBX1P83916 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.51□□□□□ -1.53
CBX1P83916 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.51□□□□□ -1.53
CBX1P83916 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CBX1P83916 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.51□□□□□ -1.53
CBX1P83916 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.51□□□□□ -1.53
CBX1P83916 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.51□□□□□ -1.53
CBX1P83916 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CBX1P83916 AL592182.3-201ENST00000642132 3304 ntBASIC5.51□□□□□ -1.53
CBX1P83916 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC5.51□□□□□ -1.53
CBX1P83916 CR382285.2-201ENST00000624662 1495 ntBASIC5.51□□□□□ -1.53
CBX1P83916 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.51□□□□□ -1.53
CBX1P83916 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.5□□□□□ -1.53
CBX1P83916 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CBX1P83916 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.5□□□□□ -1.53
CBX1P83916 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.5□□□□□ -1.53
CBX1P83916 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.5□□□□□ -1.53
CBX1P83916 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.5□□□□□ -1.53
CBX1P83916 AC011503.2-201ENST00000594230 1500 ntBASIC5.5□□□□□ -1.53
CBX1P83916 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CBX1P83916 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CBX1P83916 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CBX1P83916 AL356968.2-201ENST00000412769 1257 ntBASIC5.5□□□□□ -1.53
CBX1P83916 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.5□□□□□ -1.53
CBX1P83916 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.5□□□□□ -1.53
CBX1P83916 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CBX1P83916 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.5□□□□□ -1.53
CBX1P83916 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.5□□□□□ -1.53
CBX1P83916 GAPDHP37-201ENST00000442317 968 ntBASIC5.5□□□□□ -1.53
CBX1P83916 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CBX1P83916 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.5□□□□□ -1.53
CBX1P83916 RN7SL515P-201ENST00000463999 297 ntBASIC5.5□□□□□ -1.53
CBX1P83916 SNX18P25-201ENST00000510539 758 ntBASIC5.5□□□□□ -1.53
CBX1P83916 RNU2-45P-201ENST00000516068 187 ntBASIC5.5□□□□□ -1.53
CBX1P83916 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.5□□□□□ -1.53
CBX1P83916 CASP1P2-201ENST00000526830 1258 ntBASIC5.5□□□□□ -1.53
CBX1P83916 AP004607.5-201ENST00000532034 217 ntBASIC5.5□□□□□ -1.53
CBX1P83916 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.5□□□□□ -1.53
CBX1P83916 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.5□□□□□ -1.53
CBX1P83916 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.5□□□□□ -1.53
CBX1P83916 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.5□□□□□ -1.53
CBX1P83916 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.5□□□□□ -1.53
CBX1P83916 AL713998.2-201ENST00000604538 1198 ntBASIC5.5□□□□□ -1.53
CBX1P83916 AL390877.1-201ENST00000605704 214 ntBASIC5.5□□□□□ -1.53
CBX1P83916 AL008582.1-201ENST00000609612 442 ntBASIC5.5□□□□□ -1.53
CBX1P83916 AC096586.2-201ENST00000610260 441 ntBASIC5.5□□□□□ -1.53
CBX1P83916 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.5□□□□□ -1.53
CBX1P83916 AL158196.1-201ENST00000616786 434 ntBASIC5.5□□□□□ -1.53
CBX1P83916 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC5.5□□□□□ -1.53
CBX1P83916 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.5□□□□□ -1.53
CBX1P83916 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.5□□□□□ -1.53
CBX1P83916 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CBX1P83916 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CBX1P83916 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CBX1P83916 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.5□□□□□ -1.53
CBX1P83916 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CBX1P83916 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CBX1P83916 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CBX1P83916 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms