Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 MIR16-2-201ENST00000362117 81 ntBASIC4.74□□□□□ -1.65
CX3CL1P78423 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CX3CL1P78423 RNU6-729P-201ENST00000384399 107 ntBASIC4.74□□□□□ -1.65
CX3CL1P78423 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CX3CL1P78423 RNA5SP431-201ENST00000410312 120 ntBASIC4.74□□□□□ -1.65
CX3CL1P78423 RNU4-74P-201ENST00000411280 161 ntBASIC4.74□□□□□ -1.65
CX3CL1P78423 AL354692.1-201ENST00000423044 315 ntBASIC4.74□□□□□ -1.65
CX3CL1P78423 AC007679.3-201ENST00000434035 414 ntBASIC4.74□□□□□ -1.65
CX3CL1P78423 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.74□□□□□ -1.65
CX3CL1P78423 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.74□□□□□ -1.65
CX3CL1P78423 AMYP1-201ENST00000440059 1023 ntBASIC4.74□□□□□ -1.65
CX3CL1P78423 MTCYBP12-201ENST00000440559 1134 ntBASIC4.74□□□□□ -1.65
CX3CL1P78423 ATP5LP2-201ENST00000440646 311 ntBASIC4.74□□□□□ -1.65
CX3CL1P78423 RNF2P1-201ENST00000442955 1010 ntBASIC4.74□□□□□ -1.65
CX3CL1P78423 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.74□□□□□ -1.65
CX3CL1P78423 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CX3CL1P78423 HMGN1P5-201ENST00000448591 263 ntBASIC4.74□□□□□ -1.65
CX3CL1P78423 AC023194.2-201ENST00000465398 406 ntBASIC4.74□□□□□ -1.65
CX3CL1P78423 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC4.74□□□□□ -1.65
CX3CL1P78423 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC4.74□□□□□ -1.65
CX3CL1P78423 RBBP4P1-201ENST00000502424 1276 ntBASIC4.74□□□□□ -1.65
CX3CL1P78423 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CX3CL1P78423 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.74□□□□□ -1.65
CX3CL1P78423 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.74□□□□□ -1.65
CX3CL1P78423 IGKV3D-25-201ENST00000519599 235 ntBASIC4.74□□□□□ -1.65
CX3CL1P78423 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.74□□□□□ -1.65
CX3CL1P78423 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.74□□□□□ -1.65
CX3CL1P78423 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CX3CL1P78423 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.74□□□□□ -1.65
CX3CL1P78423 RPA2P1-201ENST00000556557 721 ntBASIC4.74□□□□□ -1.65
CX3CL1P78423 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.74□□□□□ -1.65
CX3CL1P78423 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC4.74□□□□□ -1.65
CX3CL1P78423 AL022394.1-201ENST00000606979 292 ntBASIC4.74□□□□□ -1.65
CX3CL1P78423 AC012557.1-201ENST00000607115 611 ntBASIC4.74□□□□□ -1.65
CX3CL1P78423 AC245014.3-201ENST00000618589 347 ntBASIC4.74□□□□□ -1.65
CX3CL1P78423 AL049777.1-201ENST00000622740 518 ntBASIC4.74□□□□□ -1.65
CX3CL1P78423 AL138955.1-201ENST00000622881 1040 ntBASIC4.74□□□□□ -1.65
CX3CL1P78423 AC015660.5-201ENST00000623238 564 ntBASIC4.74□□□□□ -1.65
CX3CL1P78423 AC007683.2-201ENST00000624681 714 ntBASIC4.74□□□□□ -1.65
CX3CL1P78423 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.74□□□□□ -1.65
CX3CL1P78423 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CX3CL1P78423 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CX3CL1P78423 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CX3CL1P78423 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CX3CL1P78423 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CX3CL1P78423 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CX3CL1P78423 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CX3CL1P78423 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.74□□□□□ -1.65
CX3CL1P78423 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CX3CL1P78423 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CX3CL1P78423 AC026523.2-201ENST00000625039 7739 ntBASIC4.74□□□□□ -1.65
CX3CL1P78423 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CX3CL1P78423 QRSL1P1-201ENST00000400977 1540 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 LYARP1-201ENST00000436977 1501 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
CX3CL1P78423 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CX3CL1P78423 AC007382.1-201ENST00000624376 2618 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CX3CL1P78423 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CX3CL1P78423 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CX3CL1P78423 U3.10-201ENST00000364459 214 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 RNA5SP211-201ENST00000365516 117 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 RN7SKP187-201ENST00000365536 330 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC4.73□□□□□ -1.65
CX3CL1P78423 CHMP1B2P-201ENST00000399581 597 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 AC099535.1-201ENST00000408928 371 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.73□□□□□ -1.65
CX3CL1P78423 VN1R42P-201ENST00000424651 344 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 HSPE1P16-201ENST00000426640 348 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 AC099677.3-201ENST00000427081 395 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.73□□□□□ -1.65
CX3CL1P78423 MRPL50P1-201ENST00000431951 384 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CX3CL1P78423 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CX3CL1P78423 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.73□□□□□ -1.65
CX3CL1P78423 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC4.73□□□□□ -1.65
CX3CL1P78423 RPS7P3-201ENST00000443360 580 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.73□□□□□ -1.65
CX3CL1P78423 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.73□□□□□ -1.65
CX3CL1P78423 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CX3CL1P78423 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.73□□□□□ -1.65
CX3CL1P78423 CFL1P4-201ENST00000451536 498 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4.73□□□□□ -1.65
CX3CL1P78423 PPIAP27-201ENST00000453800 265 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 AC068228.1-201ENST00000461723 211 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 RPL32P14-201ENST00000463196 378 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 AC107015.1-201ENST00000466902 747 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 AC023245.1-201ENST00000468501 517 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC4.73□□□□□ -1.65
CX3CL1P78423 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.73□□□□□ -1.65
CX3CL1P78423 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.73□□□□□ -1.65
CX3CL1P78423 AC008629.2-201ENST00000503783 483 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 SNORA70.11-201ENST00000515987 138 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 SNORA70.13-201ENST00000516116 138 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 RN7SKP288-201ENST00000516227 268 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 RN7SKP238-201ENST00000516483 249 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC4.73□□□□□ -1.65
CX3CL1P78423 HIGD1AP18-201ENST00000520730 278 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 OR8Q1P-201ENST00000526467 655 ntBASIC4.73□□□□□ -1.65
CX3CL1P78423 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms