Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH6P55285 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.6□□□□□ -1.51
CDH6P55285 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CDH6P55285 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
CDH6P55285 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CDH6P55285 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CDH6P55285 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH6P55285 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CDH6P55285 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
CDH6P55285 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH6P55285 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH6P55285 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.59□□□□□ -1.51
CDH6P55285 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CDH6P55285 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH6P55285 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH6P55285 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.59□□□□□ -1.51
CDH6P55285 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH6P55285 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDH6P55285 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDH6P55285 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH6P55285 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.59□□□□□ -1.51
CDH6P55285 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH6P55285 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH6P55285 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CDH6P55285 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CDH6P55285 RNA5SP319-201ENST00000362768 119 ntBASIC5.59□□□□□ -1.51
CDH6P55285 RN7SKP124-201ENST00000364730 341 ntBASIC5.59□□□□□ -1.51
CDH6P55285 RNU6-673P-201ENST00000365084 104 ntBASIC5.59□□□□□ -1.51
CDH6P55285 RNA5SP241-201ENST00000391326 114 ntBASIC5.59□□□□□ -1.51
CDH6P55285 AL445213.1-201ENST00000412589 747 ntBASIC5.59□□□□□ -1.51
CDH6P55285 AC079809.1-201ENST00000415468 276 ntBASIC5.59□□□□□ -1.51
CDH6P55285 AC009506.2-201ENST00000420635 840 ntBASIC5.59□□□□□ -1.51
CDH6P55285 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CDH6P55285 AL035090.1-201ENST00000454835 332 ntBASIC5.59□□□□□ -1.51
CDH6P55285 RANP1-206ENST00000455094 651 ntBASIC5.59□□□□□ -1.51
CDH6P55285 SETP20-201ENST00000457046 852 ntBASIC5.59□□□□□ -1.51
CDH6P55285 AP000797.2-201ENST00000475768 606 ntBASIC5.59□□□□□ -1.51
CDH6P55285 RN7SL717P-201ENST00000478343 297 ntBASIC5.59□□□□□ -1.51
CDH6P55285 RN7SL466P-201ENST00000497546 295 ntBASIC5.59□□□□□ -1.51
CDH6P55285 AC090638.1-201ENST00000498296 909 ntBASIC5.59□□□□□ -1.51
CDH6P55285 SNORA70.11-201ENST00000515987 138 ntBASIC5.59□□□□□ -1.51
CDH6P55285 SNORA70.13-201ENST00000516116 138 ntBASIC5.59□□□□□ -1.51
CDH6P55285 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.59□□□□□ -1.51
CDH6P55285 AC090286.3-201ENST00000573133 187 ntBASIC5.59□□□□□ -1.51
CDH6P55285 AC009027.1-201ENST00000604510 479 ntBASIC5.59□□□□□ -1.51
CDH6P55285 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.59□□□□□ -1.51
CDH6P55285 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.59□□□□□ -1.51
CDH6P55285 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.59□□□□□ -1.51
CDH6P55285 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CDH6P55285 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CDH6P55285 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDH6P55285 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDH6P55285 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH6P55285 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.59□□□□□ -1.51
CDH6P55285 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
CDH6P55285 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.59□□□□□ -1.52
CDH6P55285 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CDH6P55285 AC010266.2-201ENST00000564741 3255 ntBASIC5.59□□□□□ -1.52
CDH6P55285 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.52
CDH6P55285 AC079298.1-201ENST00000625026 1619 ntBASIC5.59□□□□□ -1.52
CDH6P55285 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH6P55285 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH6P55285 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH6P55285 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH6P55285 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH6P55285 AC006484.1-201ENST00000435086 1884 ntBASIC5.58□□□□□ -1.52
CDH6P55285 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH6P55285 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH6P55285 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH6P55285 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH6P55285 RNA5SP234-201ENST00000363916 119 ntBASIC5.58□□□□□ -1.52
CDH6P55285 SNORA5.1-201ENST00000384275 131 ntBASIC5.58□□□□□ -1.52
CDH6P55285 AL133388.1-201ENST00000404509 287 ntBASIC5.58□□□□□ -1.52
CDH6P55285 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.58□□□□□ -1.52
CDH6P55285 PRUNEP1-201ENST00000425846 705 ntBASIC5.58□□□□□ -1.52
CDH6P55285 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH6P55285 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH6P55285 FTLP19-201ENST00000433300 394 ntBASIC5.58□□□□□ -1.52
CDH6P55285 RPL19P16-201ENST00000433839 588 ntBASIC5.58□□□□□ -1.52
CDH6P55285 AC012075.1-201ENST00000436549 580 ntBASIC5.58□□□□□ -1.52
CDH6P55285 AC016772.1-201ENST00000444170 1261 ntBASIC5.58□□□□□ -1.52
CDH6P55285 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH6P55285 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH6P55285 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH6P55285 AC092709.1-201ENST00000521355 1045 ntBASIC5.58□□□□□ -1.52
CDH6P55285 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH6P55285 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH6P55285 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH6P55285 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH6P55285 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH6P55285 AC005341.1-201ENST00000571086 708 ntBASIC5.58□□□□□ -1.52
CDH6P55285 AC020978.7-201ENST00000575953 1187 ntBASIC5.58□□□□□ -1.52
CDH6P55285 AC060766.1-201ENST00000590824 627 ntBASIC5.58□□□□□ -1.52
CDH6P55285 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.58□□□□□ -1.52
CDH6P55285 AC000068.2-201ENST00000608816 460 ntBASIC5.58□□□□□ -1.52
CDH6P55285 Z95327.3-201ENST00000610385 572 ntBASIC5.58□□□□□ -1.52
CDH6P55285 AC109583.2-201ENST00000617367 129 ntBASIC5.58□□□□□ -1.52
CDH6P55285 AL512356.3-201ENST00000623005 461 ntBASIC5.58□□□□□ -1.52
CDH6P55285 AP003400.3-201ENST00000624904 346 ntBASIC5.58□□□□□ -1.52
CDH6P55285 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms