Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CX3CR1P49238 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CR1P49238 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CR1P49238 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CR1P49238 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CR1P49238 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.81□□□□□ -1.64
CX3CR1P49238 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CX3CR1P49238 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CR1P49238 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.81□□□□□ -1.64
CX3CR1P49238 AC114786.1-201ENST00000512892 1415 ntBASIC4.8□□□□□ -1.64
CX3CR1P49238 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.8□□□□□ -1.64
CX3CR1P49238 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
CX3CR1P49238 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CX3CR1P49238 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CX3CR1P49238 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CX3CR1P49238 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CX3CR1P49238 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CX3CR1P49238 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
CX3CR1P49238 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.8□□□□□ -1.64
CX3CR1P49238 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CX3CR1P49238 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.8□□□□□ -1.64
CX3CR1P49238 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CX3CR1P49238 RNU2-18P-201ENST00000411224 162 ntBASIC4.8□□□□□ -1.64
CX3CR1P49238 VN1R31P-201ENST00000417498 730 ntBASIC4.8□□□□□ -1.64
CX3CR1P49238 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CX3CR1P49238 TRGV7-201ENST00000427089 353 ntBASIC4.8□□□□□ -1.64
CX3CR1P49238 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.8□□□□□ -1.64
CX3CR1P49238 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.8□□□□□ -1.64
CX3CR1P49238 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.8□□□□□ -1.64
CX3CR1P49238 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CX3CR1P49238 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4.8□□□□□ -1.64
CX3CR1P49238 LRRC37A14P-201ENST00000452297 462 ntBASIC4.8□□□□□ -1.64
CX3CR1P49238 AL445665.1-202ENST00000452436 324 ntBASIC4.8□□□□□ -1.64
CX3CR1P49238 VDAC2P4-201ENST00000452925 711 ntBASIC4.8□□□□□ -1.64
CX3CR1P49238 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.8□□□□□ -1.64
CX3CR1P49238 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.8□□□□□ -1.64
CX3CR1P49238 RN7SL741P-201ENST00000482473 289 ntBASIC4.8□□□□□ -1.64
CX3CR1P49238 AC069304.1-201ENST00000491593 704 ntBASIC4.8□□□□□ -1.64
CX3CR1P49238 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CX3CR1P49238 USP9YP2-201ENST00000504503 1000 ntBASIC4.8□□□□□ -1.64
CX3CR1P49238 USP9YP1-201ENST00000513521 1002 ntBASIC4.8□□□□□ -1.64
CX3CR1P49238 SNORA43.3-201ENST00000517240 103 ntBASIC4.8□□□□□ -1.64
CX3CR1P49238 AC025423.2-201ENST00000537570 439 ntBASIC4.8□□□□□ -1.64
CX3CR1P49238 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.8□□□□□ -1.64
CX3CR1P49238 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.8□□□□□ -1.64
CX3CR1P49238 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.8□□□□□ -1.64
CX3CR1P49238 AC106730.2-201ENST00000566641 540 ntBASIC4.8□□□□□ -1.64
CX3CR1P49238 MRPS21P7-201ENST00000566937 238 ntBASIC4.8□□□□□ -1.64
CX3CR1P49238 AP005403.1-201ENST00000579720 229 ntBASIC4.8□□□□□ -1.64
CX3CR1P49238 AC134669.1-201ENST00000581275 672 ntBASIC4.8□□□□□ -1.64
CX3CR1P49238 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.8□□□□□ -1.64
CX3CR1P49238 PPATP2-201ENST00000605635 508 ntBASIC4.8□□□□□ -1.64
CX3CR1P49238 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.8□□□□□ -1.64
CX3CR1P49238 AL096712.1-201ENST00000614561 159 ntBASIC4.8□□□□□ -1.64
CX3CR1P49238 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.8□□□□□ -1.64
CX3CR1P49238 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC4.8□□□□□ -1.64
CX3CR1P49238 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.8□□□□□ -1.64
CX3CR1P49238 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CX3CR1P49238 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.8□□□□□ -1.64
CX3CR1P49238 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CX3CR1P49238 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CX3CR1P49238 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.8□□□□□ -1.64
CX3CR1P49238 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CX3CR1P49238 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CX3CR1P49238 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
CX3CR1P49238 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CX3CR1P49238 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CX3CR1P49238 AP005432.1-201ENST00000580891 3485 ntBASIC4.8□□□□□ -1.64
CX3CR1P49238 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CX3CR1P49238 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CX3CR1P49238 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CX3CR1P49238 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CX3CR1P49238 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CX3CR1P49238 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.79□□□□□ -1.64
CX3CR1P49238 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CX3CR1P49238 AC233968.1-201ENST00000611212 1300 ntBASIC4.79□□□□□ -1.64
CX3CR1P49238 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.79□□□□□ -1.64
CX3CR1P49238 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CX3CR1P49238 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CX3CR1P49238 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CX3CR1P49238 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CX3CR1P49238 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.79□□□□□ -1.64
CX3CR1P49238 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.79□□□□□ -1.64
CX3CR1P49238 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CX3CR1P49238 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.79□□□□□ -1.64
CX3CR1P49238 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CX3CR1P49238 AC023490.2-201ENST00000359859 470 ntBASIC4.79□□□□□ -1.64
CX3CR1P49238 RNU6-1331P-201ENST00000363658 106 ntBASIC4.79□□□□□ -1.64
CX3CR1P49238 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.79□□□□□ -1.64
CX3CR1P49238 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CX3CR1P49238 AC099535.1-201ENST00000408928 371 ntBASIC4.79□□□□□ -1.64
CX3CR1P49238 HMGN1P20-201ENST00000411849 300 ntBASIC4.79□□□□□ -1.64
CX3CR1P49238 OR2AT2P-201ENST00000413438 905 ntBASIC4.79□□□□□ -1.64
CX3CR1P49238 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CX3CR1P49238 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CX3CR1P49238 AL450996.1-201ENST00000445574 1202 ntBASIC4.79□□□□□ -1.64
CX3CR1P49238 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CX3CR1P49238 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC4.79□□□□□ -1.64
CX3CR1P49238 UBFD1P1-201ENST00000473259 814 ntBASIC4.79□□□□□ -1.64
CX3CR1P49238 AL049874.2-201ENST00000492636 288 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms