Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.21□□□□□ -1.42
COL4A5P29400 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.21□□□□□ -1.42
COL4A5P29400 NPM1P42-201ENST00000560329 862 ntBASIC6.21□□□□□ -1.42
COL4A5P29400 SS18L2P2-201ENST00000583960 235 ntBASIC6.21□□□□□ -1.42
COL4A5P29400 RPL26P30-202ENST00000602923 645 ntBASIC6.21□□□□□ -1.42
COL4A5P29400 AC135068.12-201ENST00000637370 931 ntBASIC6.21□□□□□ -1.42
COL4A5P29400 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL4A5P29400 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL4A5P29400 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
COL4A5P29400 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.21□□□□□ -1.42
COL4A5P29400 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL4A5P29400 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL4A5P29400 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL4A5P29400 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL4A5P29400 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL4A5P29400 AC015799.1-201ENST00000622996 3122 ntBASIC6.21□□□□□ -1.42
COL4A5P29400 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A5P29400 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
COL4A5P29400 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.2□□□□□ -1.42
COL4A5P29400 MAPK10-304ENST00000641341 3984 ntBASIC6.2□□□□□ -1.42
COL4A5P29400 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC6.2□□□□□ -1.42
COL4A5P29400 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.2□□□□□ -1.42
COL4A5P29400 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.2□□□□□ -1.42
COL4A5P29400 RN7SKP21-201ENST00000516503 220 ntBASIC6.2□□□□□ -1.42
COL4A5P29400 IGKV1-32-201ENST00000519290 311 ntBASIC6.2□□□□□ -1.42
COL4A5P29400 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC6.2□□□□□ -1.42
COL4A5P29400 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC6.2□□□□□ -1.42
COL4A5P29400 AC060780.2-201ENST00000589047 198 ntBASIC6.2□□□□□ -1.42
COL4A5P29400 AL162431.4-201ENST00000604674 411 ntBASIC6.2□□□□□ -1.42
COL4A5P29400 AC005377.1-201ENST00000605126 456 ntBASIC6.2□□□□□ -1.42
COL4A5P29400 AL034374.2-201ENST00000605281 548 ntBASIC6.2□□□□□ -1.42
COL4A5P29400 AL445423.1-201ENST00000609941 536 ntBASIC6.2□□□□□ -1.42
COL4A5P29400 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.2□□□□□ -1.42
COL4A5P29400 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.2□□□□□ -1.42
COL4A5P29400 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.2□□□□□ -1.42
COL4A5P29400 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A5P29400 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A5P29400 AC022893.2-201ENST00000564832 3296 ntBASIC6.2□□□□□ -1.42
COL4A5P29400 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A5P29400 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A5P29400 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.2□□□□□ -1.42
COL4A5P29400 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.2□□□□□ -1.42
COL4A5P29400 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A5P29400 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A5P29400 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A5P29400 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A5P29400 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.2□□□□□ -1.42
COL4A5P29400 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
COL4A5P29400 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
COL4A5P29400 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.2□□□□□ -1.42
COL4A5P29400 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A5P29400 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC6.2□□□□□ -1.42
COL4A5P29400 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A5P29400 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A5P29400 RNU1-59P-201ENST00000364829 162 ntBASIC6.2□□□□□ -1.42
COL4A5P29400 MIR23A-201ENST00000385245 73 ntBASIC6.2□□□□□ -1.42
COL4A5P29400 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.2□□□□□ -1.42
COL4A5P29400 OR7E125P-201ENST00000443450 846 ntBASIC6.2□□□□□ -1.42
COL4A5P29400 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A5P29400 AC093827.1-201ENST00000480094 861 ntBASIC6.2□□□□□ -1.42
COL4A5P29400 AC011005.3-201ENST00000491624 395 ntBASIC6.2□□□□□ -1.42
COL4A5P29400 AP002981.1-201ENST00000517692 975 ntBASIC6.2□□□□□ -1.42
COL4A5P29400 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.2□□□□□ -1.42
COL4A5P29400 U1.25-201ENST00000614085 162 ntBASIC6.2□□□□□ -1.42
COL4A5P29400 U1.34-201ENST00000618578 162 ntBASIC6.2□□□□□ -1.42
COL4A5P29400 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.2□□□□□ -1.42
COL4A5P29400 U1.31-201ENST00000620022 160 ntBASIC6.2□□□□□ -1.42
COL4A5P29400 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC6.2□□□□□ -1.42
COL4A5P29400 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
COL4A5P29400 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A5P29400 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
COL4A5P29400 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
COL4A5P29400 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL4A5P29400 AC009962.1-201ENST00000567327 3813 ntBASIC6.19□□□□□ -1.42
COL4A5P29400 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
COL4A5P29400 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.19□□□□□ -1.42
COL4A5P29400 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.19□□□□□ -1.42
COL4A5P29400 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.19□□□□□ -1.42
COL4A5P29400 BRD7P6-201ENST00000431406 1860 ntBASIC6.19□□□□□ -1.42
COL4A5P29400 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC6.19□□□□□ -1.42
COL4A5P29400 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL4A5P29400 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL4A5P29400 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL4A5P29400 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.19□□□□□ -1.42
COL4A5P29400 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL4A5P29400 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.19□□□□□ -1.42
COL4A5P29400 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.19□□□□□ -1.42
COL4A5P29400 AL354714.3-201ENST00000447284 493 ntBASIC6.19□□□□□ -1.42
COL4A5P29400 REG1CP-206ENST00000447469 496 ntBASIC6.19□□□□□ -1.42
COL4A5P29400 RN7SL41P-201ENST00000476144 297 ntBASIC6.19□□□□□ -1.42
COL4A5P29400 OR5M2P-201ENST00000529003 936 ntBASIC6.19□□□□□ -1.42
COL4A5P29400 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.19□□□□□ -1.42
COL4A5P29400 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.19□□□□□ -1.42
COL4A5P29400 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC6.19□□□□□ -1.42
COL4A5P29400 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
COL4A5P29400 AC098935.2-201ENST00000604222 466 ntBASIC6.19□□□□□ -1.42
COL4A5P29400 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.19□□□□□ -1.42
COL4A5P29400 AC091932.2-201ENST00000623014 291 ntBASIC6.19□□□□□ -1.42
COL4A5P29400 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC6.19□□□□□ -1.42
COL4A5P29400 AC012213.2-201ENST00000562917 4597 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms