Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC012146.2-201ENST00000576545 416 ntBASIC5.3□□□□□ -1.56
PTPN6P29350 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.3□□□□□ -1.56
PTPN6P29350 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PTPN6P29350 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
PTPN6P29350 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PTPN6P29350 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PTPN6P29350 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PTPN6P29350 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PTPN6P29350 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PTPN6P29350 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PTPN6P29350 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PTPN6P29350 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
PTPN6P29350 AC079097.1-201ENST00000512187 1399 ntBASIC5.29□□□□□ -1.56
PTPN6P29350 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PTPN6P29350 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PTPN6P29350 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
PTPN6P29350 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PTPN6P29350 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
PTPN6P29350 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.29□□□□□ -1.56
PTPN6P29350 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
PTPN6P29350 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PTPN6P29350 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
PTPN6P29350 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
PTPN6P29350 AC006484.1-201ENST00000435086 1884 ntBASIC5.29□□□□□ -1.56
PTPN6P29350 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
PTPN6P29350 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PTPN6P29350 SNORA64.1-201ENST00000362600 132 ntBASIC5.29□□□□□ -1.56
PTPN6P29350 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PTPN6P29350 AC007161.1-204ENST00000423039 460 ntBASIC5.29□□□□□ -1.56
PTPN6P29350 AC127526.2-201ENST00000426436 775 ntBASIC5.29□□□□□ -1.56
PTPN6P29350 HMGB3P10-201ENST00000434734 572 ntBASIC5.29□□□□□ -1.56
PTPN6P29350 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.29□□□□□ -1.56
PTPN6P29350 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.29□□□□□ -1.56
PTPN6P29350 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.29□□□□□ -1.56
PTPN6P29350 TAAR4P-201ENST00000454843 1039 ntBASIC5.29□□□□□ -1.56
PTPN6P29350 NXT1P1-201ENST00000458481 316 ntBASIC5.29□□□□□ -1.56
PTPN6P29350 PPIAP19-201ENST00000486414 492 ntBASIC5.29□□□□□ -1.56
PTPN6P29350 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.29□□□□□ -1.56
PTPN6P29350 MTATP6P1-201ENST00000514057 681 ntBASIC5.29□□□□□ -1.56
PTPN6P29350 SCARNA6.1-201ENST00000516989 238 ntBASIC5.29□□□□□ -1.56
PTPN6P29350 AC020937.1-201ENST00000519677 1013 ntBASIC5.29□□□□□ -1.56
PTPN6P29350 PMS2P3-207ENST00000529061 717 ntBASIC5.29□□□□□ -1.56
PTPN6P29350 OR5AM1P-201ENST00000532136 1032 ntBASIC5.29□□□□□ -1.56
PTPN6P29350 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.29□□□□□ -1.56
PTPN6P29350 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.29□□□□□ -1.56
PTPN6P29350 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
PTPN6P29350 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.29□□□□□ -1.56
PTPN6P29350 DPPA2P4-201ENST00000563717 878 ntBASIC5.29□□□□□ -1.56
PTPN6P29350 AP001496.3-201ENST00000580230 913 ntBASIC5.29□□□□□ -1.56
PTPN6P29350 MIR4311-201ENST00000580794 100 ntBASIC5.29□□□□□ -1.56
PTPN6P29350 AC015802.2-201ENST00000589690 189 ntBASIC5.29□□□□□ -1.56
PTPN6P29350 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.29□□□□□ -1.56
PTPN6P29350 MIR6729-201ENST00000618194 65 ntBASIC5.29□□□□□ -1.56
PTPN6P29350 AC127024.6-201ENST00000621598 424 ntBASIC5.29□□□□□ -1.56
PTPN6P29350 AC103703.1-201ENST00000634783 663 ntBASIC5.29□□□□□ -1.56
PTPN6P29350 MIR4302-201ENST00000638058 60 ntBASIC5.29□□□□□ -1.56
PTPN6P29350 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PTPN6P29350 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
PTPN6P29350 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
PTPN6P29350 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PTPN6P29350 AC027279.1-201ENST00000568885 4284 ntBASIC5.29□□□□□ -1.56
PTPN6P29350 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PTPN6P29350 AC239868.2-201ENST00000564237 4527 ntBASIC5.29□□□□□ -1.56
PTPN6P29350 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PTPN6P29350 AL353796.1-201ENST00000561542 3241 ntBASIC5.29□□□□□ -1.56
PTPN6P29350 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PTPN6P29350 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTPN6P29350 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTPN6P29350 AL022311.1-201ENST00000623726 19416 ntBASIC5.28□□□□□ -1.56
PTPN6P29350 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTPN6P29350 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTPN6P29350 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTPN6P29350 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTPN6P29350 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PTPN6P29350 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PTPN6P29350 RN7SKP69-201ENST00000365390 305 ntBASIC5.28□□□□□ -1.56
PTPN6P29350 OR13C3-201ENST00000374781 1108 ntBASIC5.28□□□□□ -1.56
PTPN6P29350 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PTPN6P29350 AC079809.1-201ENST00000415468 276 ntBASIC5.28□□□□□ -1.56
PTPN6P29350 AC093155.2-201ENST00000420734 937 ntBASIC5.28□□□□□ -1.56
PTPN6P29350 BX119321.1-201ENST00000428912 797 ntBASIC5.28□□□□□ -1.56
PTPN6P29350 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.28□□□□□ -1.56
PTPN6P29350 AC073465.2-201ENST00000440938 498 ntBASIC5.28□□□□□ -1.56
PTPN6P29350 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.28□□□□□ -1.56
PTPN6P29350 RN7SL188P-201ENST00000469842 285 ntBASIC5.28□□□□□ -1.56
PTPN6P29350 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTPN6P29350 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.28□□□□□ -1.56
PTPN6P29350 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.28□□□□□ -1.56
PTPN6P29350 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTPN6P29350 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.28□□□□□ -1.56
PTPN6P29350 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.28□□□□□ -1.56
PTPN6P29350 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.28□□□□□ -1.56
PTPN6P29350 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.28□□□□□ -1.56
PTPN6P29350 AC122134.1-201ENST00000565664 1104 ntBASIC5.28□□□□□ -1.56
PTPN6P29350 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.28□□□□□ -1.56
PTPN6P29350 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.28□□□□□ -1.56
PTPN6P29350 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.28□□□□□ -1.56
PTPN6P29350 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.28□□□□□ -1.56
PTPN6P29350 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
PTPN6P29350 AC090607.5-201ENST00000615692 224 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms