Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.07□□□□□ -1.6
NCK1P16333 BTG1P1-201ENST00000540396 508 ntBASIC5.07□□□□□ -1.6
NCK1P16333 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.07□□□□□ -1.6
NCK1P16333 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.07□□□□□ -1.6
NCK1P16333 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.07□□□□□ -1.6
NCK1P16333 AC022884.2-201ENST00000578535 580 ntBASIC5.07□□□□□ -1.6
NCK1P16333 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.07□□□□□ -1.6
NCK1P16333 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.07□□□□□ -1.6
NCK1P16333 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.07□□□□□ -1.6
NCK1P16333 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NCK1P16333 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NCK1P16333 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NCK1P16333 MIR6839-201ENST00000620425 113 ntBASIC5.07□□□□□ -1.6
NCK1P16333 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.07□□□□□ -1.6
NCK1P16333 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
NCK1P16333 AC107021.2-201ENST00000567714 2095 ntBASIC5.07□□□□□ -1.6
NCK1P16333 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NCK1P16333 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
NCK1P16333 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NCK1P16333 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
NCK1P16333 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.07□□□□□ -1.6
NCK1P16333 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.07□□□□□ -1.6
NCK1P16333 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
NCK1P16333 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.07□□□□□ -1.6
NCK1P16333 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.07□□□□□ -1.6
NCK1P16333 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NCK1P16333 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
NCK1P16333 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NCK1P16333 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
NCK1P16333 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NCK1P16333 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NCK1P16333 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
NCK1P16333 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NCK1P16333 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NCK1P16333 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
NCK1P16333 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NCK1P16333 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NCK1P16333 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NCK1P16333 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NCK1P16333 RNU1-19P-201ENST00000363306 165 ntBASIC5.06□□□□□ -1.6
NCK1P16333 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.06□□□□□ -1.6
NCK1P16333 MIR1203-201ENST00000408812 85 ntBASIC5.06□□□□□ -1.6
NCK1P16333 AC098592.2-201ENST00000413158 265 ntBASIC5.06□□□□□ -1.6
NCK1P16333 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.06□□□□□ -1.6
NCK1P16333 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.06□□□□□ -1.6
NCK1P16333 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.06□□□□□ -1.6
NCK1P16333 AC127526.2-201ENST00000426436 775 ntBASIC5.06□□□□□ -1.6
NCK1P16333 FTLP19-201ENST00000433300 394 ntBASIC5.06□□□□□ -1.6
NCK1P16333 UBE2V2P1-201ENST00000434717 398 ntBASIC5.06□□□□□ -1.6
NCK1P16333 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.06□□□□□ -1.6
NCK1P16333 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.06□□□□□ -1.6
NCK1P16333 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.06□□□□□ -1.6
NCK1P16333 VDAC2P4-201ENST00000452925 711 ntBASIC5.06□□□□□ -1.6
NCK1P16333 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.06□□□□□ -1.6
NCK1P16333 AC098818.1-201ENST00000478593 252 ntBASIC5.06□□□□□ -1.6
NCK1P16333 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NCK1P16333 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.06□□□□□ -1.6
NCK1P16333 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.06□□□□□ -1.6
NCK1P16333 HSD3BP3-201ENST00000514706 994 ntBASIC5.06□□□□□ -1.6
NCK1P16333 MRPS5P3-201ENST00000515577 166 ntBASIC5.06□□□□□ -1.6
NCK1P16333 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.06□□□□□ -1.6
NCK1P16333 AP003033.2-201ENST00000528901 805 ntBASIC5.06□□□□□ -1.6
NCK1P16333 AC027026.1-201ENST00000532323 742 ntBASIC5.06□□□□□ -1.6
NCK1P16333 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.06□□□□□ -1.6
NCK1P16333 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.06□□□□□ -1.6
NCK1P16333 AC010615.3-201ENST00000597319 394 ntBASIC5.06□□□□□ -1.6
NCK1P16333 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.06□□□□□ -1.6
NCK1P16333 AC009027.1-201ENST00000604510 479 ntBASIC5.06□□□□□ -1.6
NCK1P16333 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.06□□□□□ -1.6
NCK1P16333 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.06□□□□□ -1.6
NCK1P16333 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
NCK1P16333 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.06□□□□□ -1.6
NCK1P16333 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NCK1P16333 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.06□□□□□ -1.6
NCK1P16333 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NCK1P16333 AC100778.3-201ENST00000580060 1750 ntBASIC5.06□□□□□ -1.6
NCK1P16333 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.06□□□□□ -1.6
NCK1P16333 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NCK1P16333 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NCK1P16333 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
NCK1P16333 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NCK1P16333 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NCK1P16333 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NCK1P16333 MTCO1P22-201ENST00000604619 1360 ntBASIC5.05□□□□□ -1.6
NCK1P16333 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
NCK1P16333 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
NCK1P16333 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NCK1P16333 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
NCK1P16333 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.05□□□□□ -1.6
NCK1P16333 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NCK1P16333 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NCK1P16333 RNA5SP131-201ENST00000365452 119 ntBASIC5.05□□□□□ -1.6
NCK1P16333 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.05□□□□□ -1.6
NCK1P16333 SNORA16A-201ENST00000384342 137 ntBASIC5.05□□□□□ -1.6
NCK1P16333 RNU6-729P-201ENST00000384399 107 ntBASIC5.05□□□□□ -1.6
NCK1P16333 DBIP1-201ENST00000401435 260 ntBASIC5.05□□□□□ -1.6
NCK1P16333 RN7SKP16-201ENST00000410180 299 ntBASIC5.05□□□□□ -1.6
NCK1P16333 CTSL3P-202ENST00000412179 788 ntBASIC5.05□□□□□ -1.6
NCK1P16333 AL359885.1-201ENST00000415786 903 ntBASIC5.05□□□□□ -1.6
NCK1P16333 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms