Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
TOP2AP11388 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TOP2AP11388 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC9.06□□□□□ -0.96
TOP2AP11388 AL132640.2-201ENST00000559968 1698 ntBASIC9.06□□□□□ -0.96
TOP2AP11388 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
TOP2AP11388 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TOP2AP11388 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TOP2AP11388 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TOP2AP11388 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC9.06□□□□□ -0.96
TOP2AP11388 MIR589-201ENST00000385238 99 ntBASIC9.05□□□□□ -0.96
TOP2AP11388 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC9.05□□□□□ -0.96
TOP2AP11388 AL161722.2-201ENST00000434731 981 ntBASIC9.05□□□□□ -0.96
TOP2AP11388 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC9.05□□□□□ -0.96
TOP2AP11388 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
TOP2AP11388 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC9.05□□□□□ -0.96
TOP2AP11388 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC9.05□□□□□ -0.96
TOP2AP11388 AL023583.1-201ENST00000607518 1143 ntBASIC9.05□□□□□ -0.96
TOP2AP11388 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC9.05□□□□□ -0.96
TOP2AP11388 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TOP2AP11388 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
TOP2AP11388 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TOP2AP11388 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TOP2AP11388 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TOP2AP11388 CASC19-243ENST00000641588 1546 ntBASIC9.05□□□□□ -0.96
TOP2AP11388 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
TOP2AP11388 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC9.05□□□□□ -0.96
TOP2AP11388 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TOP2AP11388 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TOP2AP11388 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC9.05□□□□□ -0.96
TOP2AP11388 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
TOP2AP11388 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
TOP2AP11388 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TOP2AP11388 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TOP2AP11388 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
TOP2AP11388 BX679664.2-201ENST00000439282 283 ntBASIC9.05□□□□□ -0.96
TOP2AP11388 NDUFA12P1-201ENST00000455914 406 ntBASIC9.05□□□□□ -0.96
TOP2AP11388 AC010350.1-201ENST00000504908 231 ntBASIC9.05□□□□□ -0.96
TOP2AP11388 RN7SKP248-201ENST00000516278 305 ntBASIC9.05□□□□□ -0.96
TOP2AP11388 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC9.05□□□□□ -0.96
TOP2AP11388 RGS5-219ENST00000528019 512 ntTSL 4 BASIC9.05□□□□□ -0.96
TOP2AP11388 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC9.05□□□□□ -0.96
TOP2AP11388 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC9.05□□□□□ -0.96
TOP2AP11388 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC9.05□□□□□ -0.96
TOP2AP11388 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC9.05□□□□□ -0.96
TOP2AP11388 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
TOP2AP11388 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
TOP2AP11388 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC9.05□□□□□ -0.96
TOP2AP11388 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC9.04□□□□□ -0.96
TOP2AP11388 ALB-219ENST00000621085 1418 ntTSL 5 BASIC9.04□□□□□ -0.96
TOP2AP11388 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
TOP2AP11388 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
TOP2AP11388 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC9.04□□□□□ -0.96
TOP2AP11388 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
TOP2AP11388 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
TOP2AP11388 RNA5SP332-201ENST00000391063 115 ntBASIC9.04□□□□□ -0.96
TOP2AP11388 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC9.04□□□□□ -0.96
TOP2AP11388 RPS29P9-201ENST00000440360 171 ntBASIC9.04□□□□□ -0.96
TOP2AP11388 AL137845.2-201ENST00000444292 988 ntBASIC9.04□□□□□ -0.96
TOP2AP11388 AC093267.1-201ENST00000489176 961 ntBASIC9.04□□□□□ -0.96
TOP2AP11388 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC9.04□□□□□ -0.96
TOP2AP11388 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC9.04□□□□□ -0.96
TOP2AP11388 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC9.04□□□□□ -0.96
TOP2AP11388 RNA5SP392-201ENST00000516905 112 ntBASIC9.04□□□□□ -0.96
TOP2AP11388 AC105129.1-201ENST00000560250 297 ntBASIC9.04□□□□□ -0.96
TOP2AP11388 AC011453.2-201ENST00000603737 729 ntBASIC9.04□□□□□ -0.96
TOP2AP11388 AC104687.2-201ENST00000604442 342 ntBASIC9.04□□□□□ -0.96
TOP2AP11388 AL162431.4-201ENST00000604674 411 ntBASIC9.04□□□□□ -0.96
TOP2AP11388 AC011626.1-201ENST00000604710 562 ntBASIC9.04□□□□□ -0.96
TOP2AP11388 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
TOP2AP11388 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
TOP2AP11388 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
TOP2AP11388 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
TOP2AP11388 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
TOP2AP11388 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC9.03□□□□□ -0.96
TOP2AP11388 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC9.03□□□□□ -0.96
TOP2AP11388 DCN-218ENST00000551354 2924 ntTSL 3 BASIC9.03□□□□□ -0.96
TOP2AP11388 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
TOP2AP11388 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
TOP2AP11388 GTF2IP5-201ENST00000414608 731 ntBASIC9.03□□□□□ -0.96
TOP2AP11388 VDAC1P6-201ENST00000430062 855 ntBASIC9.03□□□□□ -0.96
TOP2AP11388 OR52J1P-201ENST00000450596 932 ntBASIC9.03□□□□□ -0.96
TOP2AP11388 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC9.03□□□□□ -0.96
TOP2AP11388 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
TOP2AP11388 AC130364.2-201ENST00000528639 604 ntBASIC9.03□□□□□ -0.96
TOP2AP11388 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC9.03□□□□□ -0.96
TOP2AP11388 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC9.03□□□□□ -0.96
TOP2AP11388 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC9.03□□□□□ -0.96
TOP2AP11388 MIR6758-201ENST00000620653 63 ntBASIC9.03□□□□□ -0.96
TOP2AP11388 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
TOP2AP11388 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC9.03□□□□□ -0.96
TOP2AP11388 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
TOP2AP11388 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
TOP2AP11388 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
TOP2AP11388 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
TOP2AP11388 RN7SKP185-201ENST00000362813 326 ntBASIC9.02□□□□□ -0.97
TOP2AP11388 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC9.02□□□□□ -0.97
TOP2AP11388 AC069213.2-201ENST00000420238 366 ntBASIC9.02□□□□□ -0.97
TOP2AP11388 C4BPAP2-201ENST00000428434 478 ntBASIC9.02□□□□□ -0.97
TOP2AP11388 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC9.02□□□□□ -0.97
TOP2AP11388 AC020779.1-201ENST00000478757 796 ntBASIC9.02□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms