Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 AC135626.1-201ENST00000556983 435 ntBASIC4.08□□□□□ -1.76
HLA-DQA1P01909 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 AL353796.1-201ENST00000561542 3241 ntBASIC4.08□□□□□ -1.76
HLA-DQA1P01909 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.08□□□□□ -1.76
HLA-DQA1P01909 MIR4311-201ENST00000580794 100 ntBASIC4.08□□□□□ -1.76
HLA-DQA1P01909 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 AL021918.2-201ENST00000613415 194 ntBASIC4.08□□□□□ -1.76
HLA-DQA1P01909 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 AL512652.1-201ENST00000619006 500 ntBASIC4.08□□□□□ -1.76
HLA-DQA1P01909 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 AC090181.3-201ENST00000624777 1514 ntBASIC4.08□□□□□ -1.76
HLA-DQA1P01909 AP001052.1-201ENST00000626421 99 ntBASIC4.08□□□□□ -1.76
HLA-DQA1P01909 TEX41-293ENST00000630451 690 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 5S_rRNA.29-201ENST00000641250 107 ntBASIC4.08□□□□□ -1.76
HLA-DQA1P01909 OR11H2-202ENST00000641517 1085 ntBASIC4.08□□□□□ -1.76
HLA-DQA1P01909 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 AC018717.1-201ENST00000457712 1505 ntBASIC4.07□□□□□ -1.76
HLA-DQA1P01909 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 RBPJP5-201ENST00000449433 1447 ntBASIC4.07□□□□□ -1.76
HLA-DQA1P01909 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 SNORA21-201ENST00000362423 132 ntBASIC4.07□□□□□ -1.76
HLA-DQA1P01909 RN7SKP86-201ENST00000410454 332 ntBASIC4.07□□□□□ -1.76
HLA-DQA1P01909 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 NIFKP3-201ENST00000417799 865 ntBASIC4.07□□□□□ -1.76
HLA-DQA1P01909 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 AC099782.1-201ENST00000425889 474 ntBASIC4.07□□□□□ -1.76
HLA-DQA1P01909 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 TUBB4BP6-201ENST00000437576 479 ntBASIC4.07□□□□□ -1.76
HLA-DQA1P01909 RPL35AP21-201ENST00000437667 333 ntBASIC4.07□□□□□ -1.76
HLA-DQA1P01909 EEF1B2P3-201ENST00000447718 678 ntBASIC4.07□□□□□ -1.76
HLA-DQA1P01909 AL450023.1-201ENST00000450868 751 ntBASIC4.07□□□□□ -1.76
HLA-DQA1P01909 HMGB1P7-201ENST00000450921 612 ntBASIC4.07□□□□□ -1.76
HLA-DQA1P01909 AL359839.1-201ENST00000451975 1160 ntBASIC4.07□□□□□ -1.76
HLA-DQA1P01909 CYCSP34-201ENST00000458172 304 ntBASIC4.07□□□□□ -1.76
HLA-DQA1P01909 CBX1P5-201ENST00000475330 559 ntBASIC4.07□□□□□ -1.76
HLA-DQA1P01909 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 AP001960.1-201ENST00000506494 658 ntBASIC4.07□□□□□ -1.76
HLA-DQA1P01909 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 MIR4502-201ENST00000580432 81 ntBASIC4.07□□□□□ -1.76
HLA-DQA1P01909 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 SMIM12P1-201ENST00000603004 274 ntBASIC4.07□□□□□ -1.76
HLA-DQA1P01909 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 MIR6839-201ENST00000620425 113 ntBASIC4.07□□□□□ -1.76
HLA-DQA1P01909 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 AC007342.5-201ENST00000571340 2142 ntBASIC4.07□□□□□ -1.76
HLA-DQA1P01909 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DQA1P01909 ICE2P1-201ENST00000512800 1849 ntBASIC4.07□□□□□ -1.76
HLA-DQA1P01909 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 AL034370.1-201ENST00000397254 1590 ntBASIC4.06□□□□□ -1.76
HLA-DQA1P01909 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 AF287957.1-201ENST00000607368 1595 ntBASIC4.06□□□□□ -1.76
HLA-DQA1P01909 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms