Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AC006547.1-208ENST00000598339 805 ntTSL 5 BASIC8.17□□□□□ -1.1
RCCD1A6NED2 AL355598.1-201ENST00000604169 202 ntBASIC8.17□□□□□ -1.1
RCCD1A6NED2 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC8.17□□□□□ -1.1
RCCD1A6NED2 AC022743.1-201ENST00000624990 664 ntBASIC8.17□□□□□ -1.1
RCCD1A6NED2 AC119674.1-207ENST00000641355 633 ntBASIC8.17□□□□□ -1.1
RCCD1A6NED2 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC8.17□□□□□ -1.1
RCCD1A6NED2 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
RCCD1A6NED2 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
RCCD1A6NED2 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
RCCD1A6NED2 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
RCCD1A6NED2 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC8.17□□□□□ -1.1
RCCD1A6NED2 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
RCCD1A6NED2 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
RCCD1A6NED2 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
RCCD1A6NED2 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
RCCD1A6NED2 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
RCCD1A6NED2 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
RCCD1A6NED2 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
RCCD1A6NED2 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC8.17□□□□□ -1.1
RCCD1A6NED2 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RCCD1A6NED2 ARHGAP42P4-201ENST00000549782 2934 ntBASIC8.16□□□□□ -1.1
RCCD1A6NED2 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
RCCD1A6NED2 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC8.16□□□□□ -1.1
RCCD1A6NED2 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RCCD1A6NED2 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
RCCD1A6NED2 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RCCD1A6NED2 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RCCD1A6NED2 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
RCCD1A6NED2 PARN-201ENST00000341484 2100 ntTSL 2 BASIC8.16□□□□□ -1.1
RCCD1A6NED2 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC8.16□□□□□ -1.1
RCCD1A6NED2 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RCCD1A6NED2 Y_RNA.159-201ENST00000363674 87 ntBASIC8.16□□□□□ -1.1
RCCD1A6NED2 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RCCD1A6NED2 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RCCD1A6NED2 RNU1-39P-201ENST00000383897 165 ntBASIC8.16□□□□□ -1.1
RCCD1A6NED2 RNU6-74P-201ENST00000384235 107 ntBASIC8.16□□□□□ -1.1
RCCD1A6NED2 SNORA10B-201ENST00000384458 133 ntBASIC8.16□□□□□ -1.1
RCCD1A6NED2 RNU6-1105P-201ENST00000384774 107 ntBASIC8.16□□□□□ -1.1
RCCD1A6NED2 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
RCCD1A6NED2 Y_RNA.579-201ENST00000390939 94 ntBASIC8.16□□□□□ -1.1
RCCD1A6NED2 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC8.16□□□□□ -1.1
RCCD1A6NED2 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC8.16□□□□□ -1.1
RCCD1A6NED2 AC234778.1-201ENST00000399253 370 ntBASIC8.16□□□□□ -1.1
RCCD1A6NED2 VN1R8P-201ENST00000407739 893 ntBASIC8.16□□□□□ -1.1
RCCD1A6NED2 NAP1L1P2-201ENST00000414182 1089 ntBASIC8.16□□□□□ -1.1
RCCD1A6NED2 MRPL50P2-201ENST00000416821 482 ntBASIC8.16□□□□□ -1.1
RCCD1A6NED2 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RCCD1A6NED2 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC8.16□□□□□ -1.1
RCCD1A6NED2 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC8.16□□□□□ -1.1
RCCD1A6NED2 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC8.16□□□□□ -1.1
RCCD1A6NED2 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RCCD1A6NED2 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC8.16□□□□□ -1.1
RCCD1A6NED2 AL139237.1-201ENST00000446107 513 ntTSL 2 BASIC8.16□□□□□ -1.1
RCCD1A6NED2 OR2AI1P-201ENST00000448534 932 ntBASIC8.16□□□□□ -1.1
RCCD1A6NED2 AC013264.1-201ENST00000449346 455 ntTSL 2 BASIC8.16□□□□□ -1.1
RCCD1A6NED2 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RCCD1A6NED2 SLC31A1P1-201ENST00000451221 567 ntBASIC8.16□□□□□ -1.1
RCCD1A6NED2 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC8.16□□□□□ -1.1
RCCD1A6NED2 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC8.16□□□□□ -1.1
RCCD1A6NED2 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC8.16□□□□□ -1.1
RCCD1A6NED2 FTH1P23-201ENST00000492727 550 ntBASIC8.16□□□□□ -1.1
RCCD1A6NED2 AC093325.1-201ENST00000508378 326 ntBASIC8.16□□□□□ -1.1
RCCD1A6NED2 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC8.16□□□□□ -1.1
RCCD1A6NED2 RNU6-835P-201ENST00000516974 104 ntBASIC8.16□□□□□ -1.1
RCCD1A6NED2 Y_RNA.711-201ENST00000516993 102 ntBASIC8.16□□□□□ -1.1
RCCD1A6NED2 IGLVI-68-201ENST00000519525 345 ntBASIC8.16□□□□□ -1.1
RCCD1A6NED2 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC8.16□□□□□ -1.1
RCCD1A6NED2 CCAR2-208ENST00000521301 337 ntTSL 3 BASIC8.16□□□□□ -1.1
RCCD1A6NED2 ZNF345-205ENST00000526123 458 ntTSL 3 BASIC8.16□□□□□ -1.1
RCCD1A6NED2 PSMA6-202ENST00000540871 912 ntTSL 2 BASIC8.16□□□□□ -1.1
RCCD1A6NED2 NELL2-211ENST00000548826 559 ntTSL 2 BASIC8.16□□□□□ -1.1
RCCD1A6NED2 BMS1P15-201ENST00000554269 1141 ntBASIC8.16□□□□□ -1.1
RCCD1A6NED2 SUB1P2-201ENST00000556401 297 ntBASIC8.16□□□□□ -1.1
RCCD1A6NED2 AC013283.1-201ENST00000557282 492 ntBASIC8.16□□□□□ -1.1
RCCD1A6NED2 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC8.16□□□□□ -1.1
RCCD1A6NED2 RN7SL123P-201ENST00000577239 292 ntBASIC8.16□□□□□ -1.1
RCCD1A6NED2 RN7SL14P-201ENST00000579715 298 ntBASIC8.16□□□□□ -1.1
RCCD1A6NED2 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC8.16□□□□□ -1.1
RCCD1A6NED2 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC8.16□□□□□ -1.1
RCCD1A6NED2 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC8.16□□□□□ -1.1
RCCD1A6NED2 ZNF493-205ENST00000596302 546 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RCCD1A6NED2 AP000473.2-201ENST00000602659 1537 ntBASIC8.16□□□□□ -1.1
RCCD1A6NED2 AL355472.4-201ENST00000610233 626 ntBASIC8.16□□□□□ -1.1
RCCD1A6NED2 AL391903.2-201ENST00000614532 247 ntBASIC8.16□□□□□ -1.1
RCCD1A6NED2 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RCCD1A6NED2 AP003068.4-201ENST00000623192 802 ntBASIC8.16□□□□□ -1.1
RCCD1A6NED2 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC8.16□□□□□ -1.1
RCCD1A6NED2 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC8.16□□□□□ -1.1
RCCD1A6NED2 KLF8-206ENST00000640927 1150 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RCCD1A6NED2 CASC19-260ENST00000641828 2001 ntBASIC8.16□□□□□ -1.1
RCCD1A6NED2 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RCCD1A6NED2 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
RCCD1A6NED2 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC8.16□□□□□ -1.1
RCCD1A6NED2 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RCCD1A6NED2 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RCCD1A6NED2 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
RCCD1A6NED2 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RCCD1A6NED2 THAP12P1-201ENST00000398672 2203 ntBASIC8.15□□□□□ -1.1
RCCD1A6NED2 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.1
RCCD1A6NED2 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms