Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC093281.1-201ENST00000514239 549 ntBASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 RNU6-255P-201ENST00000516957 105 ntBASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 UBE2CP4-201ENST00000561405 535 ntBASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 JPT1-211ENST00000581874 517 ntTSL 5 BASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 AP001180.3-201ENST00000582221 145 ntBASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 GLUD1P2-201ENST00000583339 201 ntBASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 MIR5690-201ENST00000583739 73 ntBASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 GLUD1P8-201ENST00000585063 203 ntBASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 APOC1-202ENST00000588750 689 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 SLC14A1-214ENST00000589700 1022 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 AC006967.3-201ENST00000594086 1093 ntBASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 AL049829.3-202ENST00000604278 711 ntBASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 AL121612.2-201ENST00000612261 482 ntBASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 Metazoa_SRP.120-201ENST00000614195 252 ntBASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 AC239859.6-201ENST00000622095 213 ntBASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 AQP4-208ENST00000622234 891 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 LINC01620-205ENST00000637248 546 ntTSL 4 BASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 ATP1A2-202ENST00000392233 3338 ntTSL 5 BASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 TXNRD1-219ENST00000529546 2018 ntTSL 2 BASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 EML5-201ENST00000380664 5910 ntTSL 5 BASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 A2ML1-205ENST00000539547 3460 ntTSL 2 BASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
VPS9D1Q9Y2B5 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 USP3-201ENST00000268049 5311 ntTSL 5 BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 NFIA-208ENST00000407417 2123 ntTSL 2 BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 SNRPB2-201ENST00000246071 2452 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 HEATR4-202ENST00000553558 3523 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 AC090983.1-201ENST00000623426 3897 ntBASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 TMEM99-204ENST00000622451 2073 ntAPPRIS P2 TSL 2 BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 NUP58P1-201ENST00000502546 1738 ntBASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 PPBPP2-201ENST00000513150 1362 ntBASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 SORCS1-202ENST00000344440 3009 ntTSL 5 BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 CD44-205ENST00000352818 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 Y_RNA.555-201ENST00000384673 110 ntBASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 MRPL42P2-201ENST00000403169 426 ntBASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 MIR1184-2-201ENST00000408263 99 ntBASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 MIR1184-1-201ENST00000408606 99 ntBASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 MIR1184-3-201ENST00000408676 99 ntBASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 TMEM139-202ENST00000409102 1226 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 RPL7AP72-201ENST00000417266 768 ntBASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 AL008638.1-201ENST00000430468 473 ntTSL 2 BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 AC092809.1-201ENST00000441469 474 ntBASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 PA2G4P1-201ENST00000442248 1197 ntBASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 AL451081.2-201ENST00000448115 933 ntBASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 FTH1P27-201ENST00000449509 551 ntBASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 HMGB1P7-201ENST00000450921 612 ntBASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 AL606490.1-201ENST00000452266 765 ntBASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 RPS29P16-201ENST00000452798 171 ntBASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 MIR2053-201ENST00000459295 91 ntBASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 AC017015.1-201ENST00000477387 286 ntBASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 RN7SL28P-201ENST00000488836 298 ntBASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 AC106872.2-201ENST00000494303 480 ntBASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 RNU6-408P-201ENST00000515910 100 ntBASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 AC087521.3-201ENST00000528226 553 ntTSL 4 BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 AP002373.2-201ENST00000541631 1060 ntBASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 APPL2-203ENST00000546731 684 ntTSL 2 BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 AC079384.1-201ENST00000548506 600 ntTSL 4 BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 AC138907.5-201ENST00000561744 273 ntTSL 5 BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 AC113195.1-201ENST00000579952 141 ntBASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 MIR4314-201ENST00000583321 92 ntBASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 HIGD1B-203ENST00000587021 457 ntTSL 2 BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 AL121917.2-201ENST00000605044 390 ntBASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 AC018889.1-201ENST00000605372 397 ntBASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 AL132821.1-201ENST00000616029 394 ntBASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 AC007485.1-201ENST00000616755 206 ntBASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 uc_338.11-201ENST00000619132 160 ntBASIC8.12□□□□□ -1.11
VPS9D1Q9Y2B5 AP003068.4-201ENST00000623192 802 ntBASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms