Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 TCEA1P1-201ENST00000449716 880 ntBASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 IGKV1OR2-2-201ENST00000451163 355 ntBASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 AC239798.3-201ENST00000454459 408 ntBASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 AC025674.1-201ENST00000507074 324 ntBASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 AC023050.3-201ENST00000541142 333 ntBASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 AC044860.3-201ENST00000559957 368 ntBASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 MIR4685-201ENST00000578185 69 ntBASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 AC243830.2-201ENST00000618067 630 ntBASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 AC110994.2-201ENST00000635481 492 ntBASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 AC135068.12-201ENST00000637370 931 ntBASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 AC090132.1-201ENST00000524071 1480 ntBASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 RNU6-433P-201ENST00000363216 104 ntBASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 RN7SKP44-201ENST00000363602 316 ntBASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 AC009413.1-201ENST00000414823 399 ntBASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 RAC1P4-201ENST00000419413 579 ntBASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 AC093107.1-201ENST00000422772 609 ntBASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 BX890604.2-201ENST00000427883 474 ntBASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 AC002075.1-201ENST00000457396 676 ntBASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 RN7SL233P-201ENST00000469988 277 ntBASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 AC068781.1-201ENST00000488231 618 ntBASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 HMGB3P17-201ENST00000504195 649 ntBASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 AC079140.5-201ENST00000507882 310 ntBASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 EIF3KP1-201ENST00000513279 656 ntBASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 RNU6-1225P-201ENST00000516336 65 ntBASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 OR6M2P-201ENST00000529831 871 ntBASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 AL845331.3-202ENST00000562856 261 ntBASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 BX005040.2-201ENST00000620504 370 ntBASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 uc_338.22-201ENST00000622722 187 ntBASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 AC129778.1-202ENST00000623812 261 ntBASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 AC138627.2-201ENST00000624202 601 ntBASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 METAP1-212ENST00000625963 147 ntTSL 5 BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 AL591379.1-207ENST00000635982 261 ntBASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 AMYH02020865.1-205ENST00000636189 261 ntBASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 NCOA4P2-201ENST00000340589 1813 ntBASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 MAPK10-333ENST00000641607 2481 ntBASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 LINC01138-210ENST00000640832 1709 ntTSL 5 BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 LYARP1-201ENST00000436977 1501 ntBASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
TRIM35Q9UPQ4 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 SRL-201ENST00000399609 4214 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 RNU6-359P-201ENST00000365466 108 ntBASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 SNORD116-29-201ENST00000384516 83 ntBASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 Y_RNA.557-201ENST00000384680 107 ntBASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
TRIM35Q9UPQ4 AC025750.1-201ENST00000399891 379 ntBASIC9.8□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms