Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 AC092070.2-203ENST00000598377 3644 ntBASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 AC005294.1-201ENST00000355509 281 ntBASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 RIMKLBP2-201ENST00000424737 654 ntBASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 BRWD1P3-201ENST00000428816 390 ntBASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 LYPLA1P1-201ENST00000434514 622 ntBASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 AL627308.1-201ENST00000435693 821 ntBASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 CNOT7P2-201ENST00000441051 832 ntBASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 RPS21P4-201ENST00000487122 248 ntBASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 HIGD1AP14-201ENST00000507617 282 ntBASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 HMGB1P44-201ENST00000508597 572 ntBASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 CDC42P3-201ENST00000518493 633 ntBASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 HMGB1P40-201ENST00000525121 540 ntBASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 AC004825.1-201ENST00000555068 586 ntBASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 AC051619.2-201ENST00000559063 397 ntBASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 RBM22P1-201ENST00000578589 1214 ntBASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 AL353729.2-201ENST00000605859 1249 ntBASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 MIR6719-201ENST00000622428 87 ntBASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 AC018445.2-201ENST00000622987 260 ntBASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 KYNUP3-201ENST00000574386 1341 ntBASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 AC007938.2-201ENST00000604666 2634 ntBASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 AL442128.2-201ENST00000620246 1824 ntBASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 RNU6-167P-201ENST00000384292 106 ntBASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 AL133388.1-201ENST00000404509 287 ntBASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 NANOGP4-201ENST00000427230 913 ntBASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 RPL12P17-201ENST00000432393 498 ntBASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 GSTM5P1-201ENST00000434751 660 ntBASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 OR52B5P-201ENST00000435337 951 ntBASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 IGBP1P3-201ENST00000447449 1000 ntBASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 AZGP1P2-201ENST00000454506 345 ntBASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 RN7SL172P-201ENST00000460535 303 ntBASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 SCARNA16.4-201ENST00000516956 187 ntBASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 AC022616.2-201ENST00000523185 300 ntBASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 AP005403.1-201ENST00000579720 229 ntBASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 OR52B5P-202ENST00000641118 1110 ntBASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 AC144833.1-201ENST00000567953 4089 ntBASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 AC018809.2-201ENST00000602436 3823 ntBASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 C4BPAP1-201ENST00000415474 1893 ntBASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC4.86□□□□□ -1.63
CLCF1Q9UBD9 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms