Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.35□□□□□ -1.55
CHD7Q9P2D1 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CHD7Q9P2D1 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.35□□□□□ -1.55
CHD7Q9P2D1 TXNP2-201ENST00000443918 295 ntBASIC5.35□□□□□ -1.55
CHD7Q9P2D1 CEACAMP6-201ENST00000452007 574 ntBASIC5.35□□□□□ -1.55
CHD7Q9P2D1 SNORA84-201ENST00000459229 133 ntBASIC5.35□□□□□ -1.55
CHD7Q9P2D1 snoU13.22-201ENST00000459428 104 ntBASIC5.35□□□□□ -1.55
CHD7Q9P2D1 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.35□□□□□ -1.55
CHD7Q9P2D1 SOX5P1-201ENST00000524155 1127 ntBASIC5.35□□□□□ -1.55
CHD7Q9P2D1 AP003080.1-202ENST00000526526 915 ntBASIC5.35□□□□□ -1.55
CHD7Q9P2D1 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHD7Q9P2D1 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CHD7Q9P2D1 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHD7Q9P2D1 BRD7P6-201ENST00000431406 1860 ntBASIC5.35□□□□□ -1.55
CHD7Q9P2D1 ERG-203ENST00000398905 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHD7Q9P2D1 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHD7Q9P2D1 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.35□□□□□ -1.55
CHD7Q9P2D1 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CHD7Q9P2D1 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CHD7Q9P2D1 AC108751.5-201ENST00000492880 1336 ntBASIC5.34□□□□□ -1.55
CHD7Q9P2D1 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHD7Q9P2D1 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHD7Q9P2D1 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.34□□□□□ -1.55
CHD7Q9P2D1 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.34□□□□□ -1.55
CHD7Q9P2D1 AC020910.3-201ENST00000603701 874 ntBASIC5.34□□□□□ -1.55
CHD7Q9P2D1 AL139041.1-201ENST00000605480 610 ntBASIC5.34□□□□□ -1.55
CHD7Q9P2D1 AL353729.2-201ENST00000605859 1249 ntBASIC5.34□□□□□ -1.55
CHD7Q9P2D1 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHD7Q9P2D1 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHD7Q9P2D1 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CHD7Q9P2D1 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.34□□□□□ -1.55
CHD7Q9P2D1 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC5.34□□□□□ -1.55
CHD7Q9P2D1 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CHD7Q9P2D1 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CHD7Q9P2D1 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHD7Q9P2D1 HSPD1P8-201ENST00000400121 1658 ntBASIC5.34□□□□□ -1.55
CHD7Q9P2D1 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
CHD7Q9P2D1 IGKV7-3-201ENST00000357453 298 ntBASIC5.34□□□□□ -1.55
CHD7Q9P2D1 RNA5SP90-201ENST00000364801 99 ntBASIC5.34□□□□□ -1.55
CHD7Q9P2D1 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.34□□□□□ -1.55
CHD7Q9P2D1 BMS1P19-201ENST00000433925 393 ntBASIC5.34□□□□□ -1.55
CHD7Q9P2D1 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
CHD7Q9P2D1 AC093227.2-201ENST00000589357 285 ntBASIC5.34□□□□□ -1.55
CHD7Q9P2D1 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.34□□□□□ -1.55
CHD7Q9P2D1 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHD7Q9P2D1 ZBTB43-203ENST00000449886 5851 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
CHD7Q9P2D1 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHD7Q9P2D1 AL359195.2-201ENST00000623657 4412 ntBASIC5.34□□□□□ -1.55
CHD7Q9P2D1 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHD7Q9P2D1 AC097063.1-201ENST00000426714 1797 ntBASIC5.34□□□□□ -1.55
CHD7Q9P2D1 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.55
CHD7Q9P2D1 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
CHD7Q9P2D1 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC5.34□□□□□ -1.56
CHD7Q9P2D1 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.34□□□□□ -1.56
CHD7Q9P2D1 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.34□□□□□ -1.56
CHD7Q9P2D1 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CHD7Q9P2D1 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CHD7Q9P2D1 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.34□□□□□ -1.56
CHD7Q9P2D1 AL590240.1-201ENST00000334118 313 ntBASIC5.34□□□□□ -1.56
CHD7Q9P2D1 MIR208A-201ENST00000362287 71 ntBASIC5.34□□□□□ -1.56
CHD7Q9P2D1 AL021331.1-201ENST00000402817 582 ntBASIC5.34□□□□□ -1.56
CHD7Q9P2D1 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.34□□□□□ -1.56
CHD7Q9P2D1 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.34□□□□□ -1.56
CHD7Q9P2D1 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CHD7Q9P2D1 SDAD1P1-202ENST00000524156 2051 ntBASIC5.34□□□□□ -1.56
CHD7Q9P2D1 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
CHD7Q9P2D1 SIM1-202ENST00000369208 8430 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHD7Q9P2D1 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.33□□□□□ -1.56
CHD7Q9P2D1 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CHD7Q9P2D1 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
CHD7Q9P2D1 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHD7Q9P2D1 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.33□□□□□ -1.56
CHD7Q9P2D1 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CHD7Q9P2D1 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.33□□□□□ -1.56
CHD7Q9P2D1 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHD7Q9P2D1 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHD7Q9P2D1 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.33□□□□□ -1.56
CHD7Q9P2D1 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.33□□□□□ -1.56
CHD7Q9P2D1 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.33□□□□□ -1.56
CHD7Q9P2D1 AC073465.2-201ENST00000440938 498 ntBASIC5.33□□□□□ -1.56
CHD7Q9P2D1 NOP56P2-201ENST00000447491 769 ntBASIC5.33□□□□□ -1.56
CHD7Q9P2D1 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CHD7Q9P2D1 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.33□□□□□ -1.56
CHD7Q9P2D1 GAPDHP62-201ENST00000515313 990 ntBASIC5.33□□□□□ -1.56
CHD7Q9P2D1 NMNAT1P1-201ENST00000554095 876 ntBASIC5.33□□□□□ -1.56
CHD7Q9P2D1 AC019322.1-201ENST00000571869 389 ntBASIC5.33□□□□□ -1.56
CHD7Q9P2D1 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.33□□□□□ -1.56
CHD7Q9P2D1 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.33□□□□□ -1.56
CHD7Q9P2D1 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.33□□□□□ -1.56
CHD7Q9P2D1 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.33□□□□□ -1.56
CHD7Q9P2D1 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CHD7Q9P2D1 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CHD7Q9P2D1 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.33□□□□□ -1.56
CHD7Q9P2D1 AC004817.4-201ENST00000602396 3625 ntBASIC5.33□□□□□ -1.56
CHD7Q9P2D1 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHD7Q9P2D1 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.33□□□□□ -1.56
CHD7Q9P2D1 CASC19-260ENST00000641828 2001 ntBASIC5.33□□□□□ -1.56
CHD7Q9P2D1 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CHD7Q9P2D1 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.33□□□□□ -1.56
CHD7Q9P2D1 WBP11P1-201ENST00000562560 1931 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms