Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AL451064.2-201ENST00000623514 1654 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 MTND4P16-201ENST00000466108 1367 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AC132219.2-201ENST00000624416 2327 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 FGF7P2-201ENST00000332473 296 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 RNU6-1331P-201ENST00000363658 106 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 RNU1-87P-201ENST00000363727 170 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 YWHAZP4-201ENST00000392459 708 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 ARSFP1-201ENST00000398758 477 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AL034417.1-201ENST00000399343 800 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 NUP35P2-201ENST00000416748 943 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AC008753.1-201ENST00000423096 284 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 GAPDHP57-201ENST00000424400 585 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 B3GNT2P1-201ENST00000434960 952 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 PA2G4P1-201ENST00000442248 1197 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AC004865.1-201ENST00000442276 1003 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 USP9YP29-201ENST00000445112 563 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 UOX-201ENST00000471089 899 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AC037198.2-201ENST00000478845 733 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 RPL5P33-201ENST00000487833 905 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 PDCL3P4-201ENST00000489621 720 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AC096751.1-202ENST00000502691 1067 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AC087752.2-201ENST00000521219 281 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 ASB8-207ENST00000536953 923 ntTSL 2 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 OR5BK1P-201ENST00000550421 823 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 HIGD1AP17-201ENST00000554576 276 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 CENPUP2-201ENST00000555897 1186 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 ZNF519P2-201ENST00000557032 169 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 DPPA2P4-201ENST00000563717 878 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 ROCK1P1-201ENST00000573767 549 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 RN7SL66P-201ENST00000582099 264 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AC087575.1-201ENST00000585087 229 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AC090970.3-201ENST00000612566 866 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AC244100.4-201ENST00000617747 388 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AL356321.1-201ENST00000621360 228 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 CLUHP10-201ENST00000631979 980 ntBASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.69□□□□□ -1.5
SSBP3Q9BWW4 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms