Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PHOX2BQ99453 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 MIR137HG-205ENST00000634594 3586 ntTSL 5 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 ALB-219ENST00000621085 1418 ntTSL 5 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 GON4L-219ENST00000622608 4801 ntTSL 5 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 IGKV7-3-201ENST00000357453 298 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 RNU12-2P-201ENST00000364789 156 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 SNORA4.3-201ENST00000365564 137 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 RNU6-463P-201ENST00000384340 107 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 RNU6-769P-201ENST00000384407 104 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 SNORD86-201ENST00000391196 86 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 SNORA75.4-201ENST00000391278 119 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PHOX2BQ99453 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PHOX2BQ99453 AL034374.1-201ENST00000406329 351 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 MTATP6P18-201ENST00000417994 673 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 AC004830.1-201ENST00000420449 285 ntTSL 5 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 CACYBPP1-201ENST00000438592 684 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 RPL12P49-201ENST00000441100 121 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 TRGVB-201ENST00000453257 471 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 CTLA4-204ENST00000472206 277 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PHOX2BQ99453 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 RN7SL267P-201ENST00000485107 261 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 AC103851.1-201ENST00000506833 274 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 Vault.3-201ENST00000516676 95 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 AP005597.4-201ENST00000526762 229 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 AP001973.1-201ENST00000530177 572 ntTSL 4 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 SDHCP4-201ENST00000532834 510 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 AC087241.2-201ENST00000535801 324 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 MIR3171-201ENST00000584270 74 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 AC005262.1-201ENST00000588562 362 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 AC113554.1-201ENST00000606284 490 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 AC135050.6-202ENST00000613584 392 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 ATM-228ENST00000639240 498 ntTSL 5 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PHOX2BQ99453 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PHOX2BQ99453 MTND5P3-201ENST00000438536 1800 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 AL118496.1-201ENST00000440201 1812 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 AC087501.5-201ENST00000607496 2374 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 AC007012.2-201ENST00000623206 1676 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 CCDC113-202ENST00000443128 5110 ntTSL 2 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 PRNT-203ENST00000423718 2096 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PHOX2BQ99453 ZNF701-201ENST00000301093 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
PHOX2BQ99453 NF1P1-201ENST00000604105 2645 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 ZMIZ1-AS1-201ENST00000428862 2851 ntTSL 5 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 DHFR2-201ENST00000314636 3927 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PHOX2BQ99453 AC093311.1-201ENST00000506586 2021 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PHOX2BQ99453 AC003973.3-201ENST00000624863 2822 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
PHOX2BQ99453 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
PHOX2BQ99453 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC8.06□□□□□ -1.12
PHOX2BQ99453 FOLH1B-202ENST00000529567 2145 ntBASIC8.06□□□□□ -1.12
PHOX2BQ99453 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC8.06□□□□□ -1.12
PHOX2BQ99453 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC8.06□□□□□ -1.12
PHOX2BQ99453 CDH18-203ENST00000502796 2386 ntTSL 2 BASIC8.06□□□□□ -1.12
PHOX2BQ99453 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PHOX2BQ99453 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PHOX2BQ99453 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PHOX2BQ99453 TBX5-AS1-201ENST00000528549 3620 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PHOX2BQ99453 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
PHOX2BQ99453 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC8.06□□□□□ -1.12
PHOX2BQ99453 DPH3-202ENST00000383775 3052 ntTSL 2 BASIC8.06□□□□□ -1.12
PHOX2BQ99453 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC8.06□□□□□ -1.12
PHOX2BQ99453 SNRPEP3-201ENST00000338402 276 ntBASIC8.06□□□□□ -1.12
PHOX2BQ99453 Y_RNA.159-201ENST00000363674 87 ntBASIC8.06□□□□□ -1.12
PHOX2BQ99453 RNU1-16P-201ENST00000365477 164 ntBASIC8.06□□□□□ -1.12
PHOX2BQ99453 RN7SKP187-201ENST00000365536 330 ntBASIC8.06□□□□□ -1.12
PHOX2BQ99453 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
PHOX2BQ99453 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PHOX2BQ99453 MIR191-201ENST00000384873 92 ntBASIC8.06□□□□□ -1.12
PHOX2BQ99453 MIR559-201ENST00000385188 96 ntBASIC8.06□□□□□ -1.12
PHOX2BQ99453 MIR320B1-201ENST00000390209 79 ntBASIC8.06□□□□□ -1.12
PHOX2BQ99453 AL603650.1-201ENST00000412680 240 ntBASIC8.06□□□□□ -1.12
PHOX2BQ99453 AL592293.2-201ENST00000422292 996 ntBASIC8.06□□□□□ -1.12
PHOX2BQ99453 AC003071.2-201ENST00000423857 315 ntBASIC8.06□□□□□ -1.12
PHOX2BQ99453 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC8.06□□□□□ -1.12
PHOX2BQ99453 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC8.06□□□□□ -1.12
PHOX2BQ99453 AC108059.2-201ENST00000434626 151 ntBASIC8.06□□□□□ -1.12
PHOX2BQ99453 LINC00385-201ENST00000435044 374 ntTSL 3 BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms