Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 GLUD1P9-201ENST00000420997 1173 ntBASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 MTCO1P52-201ENST00000433928 531 ntBASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 AC110602.1-201ENST00000437414 318 ntBASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 AP000936.2-201ENST00000447151 681 ntBASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 AC073850.1-201ENST00000449243 255 ntBASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 OR52I1-201ENST00000450052 1050 ntBASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 RPL5P14-201ENST00000494197 878 ntBASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 AC021087.2-201ENST00000504656 1203 ntBASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 AC010424.1-201ENST00000506336 297 ntBASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 OR5AM1P-201ENST00000532136 1032 ntBASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 PDCL2P2-201ENST00000533651 189 ntBASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 RERGL-202ENST00000536890 367 ntTSL 3 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 AC008147.3-201ENST00000548666 354 ntBASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 SMARCE1P3-201ENST00000553649 1231 ntBASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 RSL24D1P11-201ENST00000591045 491 ntBASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 AC107993.1-201ENST00000591343 684 ntBASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 AL031985.2-201ENST00000600955 480 ntBASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 AC016877.3-201ENST00000606778 504 ntBASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 AL590240.3-201ENST00000621416 943 ntBASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 AL359740.1-201ENST00000624340 592 ntBASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 AC069542.2-201ENST00000624816 216 ntBASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 LINC02495-203ENST00000636704 242 ntBASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 ZNF90P1-201ENST00000480493 1951 ntBASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 AC122713.2-201ENST00000624942 3335 ntBASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 TATDN2P3-201ENST00000452855 3665 ntBASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 UBE2Q2P1-202ENST00000354771 883 ntBASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 SNORA17A-201ENST00000391185 133 ntBASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 ATP5F1P3-201ENST00000397213 657 ntBASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 CDY17P-201ENST00000414121 1282 ntBASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 NPM1P36-201ENST00000415681 835 ntBASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 RPL23AP85-201ENST00000421838 433 ntBASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 AL354707.3-201ENST00000427308 331 ntBASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 CDY8P-201ENST00000428380 1279 ntBASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 EMC3-AS1-205ENST00000438698 534 ntBASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 CDY20P-201ENST00000447528 1279 ntBASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 MRPL35P4-201ENST00000453682 566 ntBASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 LINC00888-204ENST00000487386 421 ntBASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 AK4P6-201ENST00000505168 528 ntBASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 TMEM97P2-201ENST00000517841 403 ntBASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 COX6B1P4-201ENST00000519826 484 ntBASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC7.4□□□□□ -1.22
SYNGAP1Q96PV0 AC010547.6-201ENST00000571789 193 ntBASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms