Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 RNA5SP394-201ENST00000364216 119 ntBASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 HMGN1P20-201ENST00000411849 300 ntBASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 RPSAP35-201ENST00000413753 818 ntBASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 RPL24P2-201ENST00000421023 475 ntBASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 LRRC37A14P-201ENST00000452297 462 ntBASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 AL445665.1-202ENST00000452436 324 ntBASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 AL358876.1-201ENST00000453364 1075 ntBASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 PFN1P8-201ENST00000497012 543 ntBASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 RNU6-551P-201ENST00000516661 103 ntBASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 TRIM51DP-201ENST00000529746 596 ntBASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 DPPA2P4-201ENST00000563717 878 ntBASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 OR7M1P-201ENST00000608946 533 ntBASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 AC117490.2-201ENST00000610042 594 ntBASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 AC109446.4-201ENST00000623235 2755 ntBASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TRAF3IP1Q8TDR0 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 RNU1-146P-201ENST00000364015 165 ntBASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 RNA5SP131-201ENST00000365452 119 ntBASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 MIR551A-201ENST00000385042 96 ntBASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 CDY17P-201ENST00000414121 1282 ntBASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 NPM1P18-201ENST00000434232 732 ntBASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 AC005297.1-201ENST00000444765 862 ntBASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 RNU6-775P-201ENST00000459318 96 ntBASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 RN7SL583P-201ENST00000475692 287 ntBASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 RN7SKP70-201ENST00000516655 271 ntBASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 AC108865.2-201ENST00000606881 432 ntBASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 AL022394.1-201ENST00000606979 292 ntBASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 AC025574.2-201ENST00000615621 514 ntBASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 MIR193BHG-214ENST00000641765 509 ntBASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 AC093849.1-201ENST00000563631 2209 ntBASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 MTCO1P8-201ENST00000416914 1523 ntBASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.74□□□□□ -1.49
TRAF3IP1Q8TDR0 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms