Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC8.29□□□□□ -1.08
CFAP43Q8NDM7 OR8Q1P-201ENST00000526467 655 ntBASIC8.29□□□□□ -1.08
CFAP43Q8NDM7 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC8.29□□□□□ -1.08
CFAP43Q8NDM7 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC8.29□□□□□ -1.08
CFAP43Q8NDM7 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC8.29□□□□□ -1.08
CFAP43Q8NDM7 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC8.29□□□□□ -1.08
CFAP43Q8NDM7 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC8.29□□□□□ -1.08
CFAP43Q8NDM7 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
CFAP43Q8NDM7 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CFAP43Q8NDM7 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CFAP43Q8NDM7 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
CFAP43Q8NDM7 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
CFAP43Q8NDM7 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC8.29□□□□□ -1.08
CFAP43Q8NDM7 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC8.29□□□□□ -1.08
CFAP43Q8NDM7 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CFAP43Q8NDM7 AC114774.1-201ENST00000507410 1770 ntBASIC8.28□□□□□ -1.08
CFAP43Q8NDM7 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CFAP43Q8NDM7 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
CFAP43Q8NDM7 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
CFAP43Q8NDM7 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
CFAP43Q8NDM7 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CFAP43Q8NDM7 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC8.28□□□□□ -1.08
CFAP43Q8NDM7 AC012519.1-201ENST00000424588 610 ntBASIC8.28□□□□□ -1.08
CFAP43Q8NDM7 AC073465.2-201ENST00000440938 498 ntBASIC8.28□□□□□ -1.08
CFAP43Q8NDM7 NDUFA5P8-201ENST00000449019 346 ntBASIC8.28□□□□□ -1.08
CFAP43Q8NDM7 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC8.28□□□□□ -1.08
CFAP43Q8NDM7 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC8.28□□□□□ -1.08
CFAP43Q8NDM7 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC8.28□□□□□ -1.08
CFAP43Q8NDM7 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC8.28□□□□□ -1.08
CFAP43Q8NDM7 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC8.28□□□□□ -1.08
CFAP43Q8NDM7 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC8.28□□□□□ -1.08
CFAP43Q8NDM7 AC015660.5-201ENST00000623238 564 ntBASIC8.28□□□□□ -1.08
CFAP43Q8NDM7 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
CFAP43Q8NDM7 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
CFAP43Q8NDM7 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC8.28□□□□□ -1.08
CFAP43Q8NDM7 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC8.28□□□□□ -1.08
CFAP43Q8NDM7 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
CFAP43Q8NDM7 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC8.28□□□□□ -1.08
CFAP43Q8NDM7 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
CFAP43Q8NDM7 RN7SKP27-201ENST00000410684 333 ntBASIC8.27□□□□□ -1.08
CFAP43Q8NDM7 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
CFAP43Q8NDM7 AL590399.4-201ENST00000436561 601 ntBASIC8.27□□□□□ -1.08
CFAP43Q8NDM7 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC8.27□□□□□ -1.08
CFAP43Q8NDM7 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC8.27□□□□□ -1.08
CFAP43Q8NDM7 XIST-210ENST00000602863 775 ntTSL 3 BASIC8.27□□□□□ -1.08
CFAP43Q8NDM7 AC009597.2-201ENST00000604659 592 ntBASIC8.27□□□□□ -1.08
CFAP43Q8NDM7 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
CFAP43Q8NDM7 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC8.27□□□□□ -1.08
CFAP43Q8NDM7 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC8.27□□□□□ -1.08
CFAP43Q8NDM7 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC8.27□□□□□ -1.08
CFAP43Q8NDM7 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CFAP43Q8NDM7 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CFAP43Q8NDM7 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC8.27□□□□□ -1.09
CFAP43Q8NDM7 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC8.27□□□□□ -1.09
CFAP43Q8NDM7 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CFAP43Q8NDM7 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CFAP43Q8NDM7 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CFAP43Q8NDM7 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC8.27□□□□□ -1.09
CFAP43Q8NDM7 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CFAP43Q8NDM7 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CFAP43Q8NDM7 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
CFAP43Q8NDM7 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CFAP43Q8NDM7 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
CFAP43Q8NDM7 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CFAP43Q8NDM7 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
CFAP43Q8NDM7 RPL12P17-201ENST00000432393 498 ntBASIC8.27□□□□□ -1.09
CFAP43Q8NDM7 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC8.27□□□□□ -1.09
CFAP43Q8NDM7 AL161747.1-201ENST00000480068 358 ntBASIC8.27□□□□□ -1.09
CFAP43Q8NDM7 BTF3P13-201ENST00000513224 490 ntBASIC8.27□□□□□ -1.09
CFAP43Q8NDM7 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC8.27□□□□□ -1.09
CFAP43Q8NDM7 TOMM20P2-201ENST00000540082 421 ntBASIC8.27□□□□□ -1.09
CFAP43Q8NDM7 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
CFAP43Q8NDM7 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
CFAP43Q8NDM7 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
CFAP43Q8NDM7 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
CFAP43Q8NDM7 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC8.27□□□□□ -1.09
CFAP43Q8NDM7 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC8.27□□□□□ -1.09
CFAP43Q8NDM7 AC012414.7-202ENST00000622705 1090 ntBASIC8.27□□□□□ -1.09
CFAP43Q8NDM7 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CFAP43Q8NDM7 AC093829.1-201ENST00000506662 1618 ntBASIC8.27□□□□□ -1.09
CFAP43Q8NDM7 AC073365.1-203ENST00000641055 1992 ntBASIC8.27□□□□□ -1.09
CFAP43Q8NDM7 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC8.26□□□□□ -1.09
CFAP43Q8NDM7 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CFAP43Q8NDM7 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
CFAP43Q8NDM7 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CFAP43Q8NDM7 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CFAP43Q8NDM7 LCOR-201ENST00000286067 4542 ntBASIC8.26□□□□□ -1.09
CFAP43Q8NDM7 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CFAP43Q8NDM7 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CFAP43Q8NDM7 AC092570.3-201ENST00000420113 693 ntBASIC8.26□□□□□ -1.09
CFAP43Q8NDM7 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC8.26□□□□□ -1.09
CFAP43Q8NDM7 AC026979.1-201ENST00000492525 396 ntBASIC8.26□□□□□ -1.09
CFAP43Q8NDM7 MIR1254-2-201ENST00000579553 63 ntBASIC8.26□□□□□ -1.09
CFAP43Q8NDM7 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC8.26□□□□□ -1.09
CFAP43Q8NDM7 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC8.26□□□□□ -1.09
CFAP43Q8NDM7 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
CFAP43Q8NDM7 SDAD1P1-202ENST00000524156 2051 ntBASIC8.26□□□□□ -1.09
CFAP43Q8NDM7 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
CFAP43Q8NDM7 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CFAP43Q8NDM7 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms