Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE4Q8N205 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE4Q8N205 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.96□□□□□ -1.3
SYNE4Q8N205 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC6.96□□□□□ -1.3
SYNE4Q8N205 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE4Q8N205 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC6.96□□□□□ -1.3
SYNE4Q8N205 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC6.96□□□□□ -1.3
SYNE4Q8N205 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC6.96□□□□□ -1.3
SYNE4Q8N205 AC022832.1-201ENST00000530718 645 ntBASIC6.96□□□□□ -1.3
SYNE4Q8N205 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.96□□□□□ -1.3
SYNE4Q8N205 AL121594.2-201ENST00000541658 472 ntBASIC6.96□□□□□ -1.3
SYNE4Q8N205 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
SYNE4Q8N205 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC6.96□□□□□ -1.3
SYNE4Q8N205 MIR4311-201ENST00000580794 100 ntBASIC6.96□□□□□ -1.3
SYNE4Q8N205 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC6.96□□□□□ -1.3
SYNE4Q8N205 AC100827.5-201ENST00000615883 426 ntBASIC6.96□□□□□ -1.3
SYNE4Q8N205 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.96□□□□□ -1.3
SYNE4Q8N205 AP002505.2-201ENST00000623585 696 ntBASIC6.96□□□□□ -1.3
SYNE4Q8N205 AP001784.1-201ENST00000624107 428 ntBASIC6.96□□□□□ -1.3
SYNE4Q8N205 CU459211.1-201ENST00000635667 749 ntBASIC6.96□□□□□ -1.3
SYNE4Q8N205 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC6.96□□□□□ -1.3
SYNE4Q8N205 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE4Q8N205 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE4Q8N205 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.96□□□□□ -1.3
SYNE4Q8N205 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE4Q8N205 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE4Q8N205 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.96□□□□□ -1.3
SYNE4Q8N205 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE4Q8N205 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE4Q8N205 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE4Q8N205 LINC01963-201ENST00000562038 3148 ntBASIC6.96□□□□□ -1.3
SYNE4Q8N205 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE4Q8N205 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.96□□□□□ -1.3
SYNE4Q8N205 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE4Q8N205 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.96□□□□□ -1.3
SYNE4Q8N205 AC104964.3-201ENST00000606115 2860 ntBASIC6.95□□□□□ -1.3
SYNE4Q8N205 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE4Q8N205 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
SYNE4Q8N205 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC6.95□□□□□ -1.3
SYNE4Q8N205 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE4Q8N205 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.95□□□□□ -1.3
SYNE4Q8N205 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE4Q8N205 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC6.95□□□□□ -1.3
SYNE4Q8N205 RNU4-23P-201ENST00000362839 140 ntBASIC6.95□□□□□ -1.3
SYNE4Q8N205 RN7SKP103-201ENST00000363848 320 ntBASIC6.95□□□□□ -1.3
SYNE4Q8N205 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE4Q8N205 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE4Q8N205 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC6.95□□□□□ -1.3
SYNE4Q8N205 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC6.95□□□□□ -1.3
SYNE4Q8N205 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.95□□□□□ -1.3
SYNE4Q8N205 ZNF736P8Y-201ENST00000451913 669 ntBASIC6.95□□□□□ -1.3
SYNE4Q8N205 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.95□□□□□ -1.3
SYNE4Q8N205 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC6.95□□□□□ -1.3
SYNE4Q8N205 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE4Q8N205 AC098862.1-201ENST00000504991 413 ntBASIC6.95□□□□□ -1.3
SYNE4Q8N205 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.95□□□□□ -1.3
SYNE4Q8N205 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.95□□□□□ -1.3
SYNE4Q8N205 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC6.95□□□□□ -1.3
SYNE4Q8N205 RN7SKP99-201ENST00000517028 307 ntBASIC6.95□□□□□ -1.3
SYNE4Q8N205 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC6.95□□□□□ -1.3
SYNE4Q8N205 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
SYNE4Q8N205 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC6.95□□□□□ -1.3
SYNE4Q8N205 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.95□□□□□ -1.3
SYNE4Q8N205 AC234775.3-201ENST00000564612 656 ntBASIC6.95□□□□□ -1.3
SYNE4Q8N205 AC106730.2-201ENST00000566641 540 ntBASIC6.95□□□□□ -1.3
SYNE4Q8N205 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE4Q8N205 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC6.95□□□□□ -1.3
SYNE4Q8N205 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.95□□□□□ -1.3
SYNE4Q8N205 AL158050.2-201ENST00000605336 568 ntBASIC6.95□□□□□ -1.3
SYNE4Q8N205 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE4Q8N205 AC016957.2-201ENST00000616998 848 ntBASIC6.95□□□□□ -1.3
SYNE4Q8N205 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC6.95□□□□□ -1.3
SYNE4Q8N205 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.95□□□□□ -1.3
SYNE4Q8N205 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.95□□□□□ -1.3
SYNE4Q8N205 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE4Q8N205 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE4Q8N205 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.95□□□□□ -1.3
SYNE4Q8N205 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
SYNE4Q8N205 HSPA8P19-201ENST00000505359 1517 ntBASIC6.95□□□□□ -1.3
SYNE4Q8N205 AC009779.8-201ENST00000641684 4384 ntBASIC6.95□□□□□ -1.3
SYNE4Q8N205 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE4Q8N205 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE4Q8N205 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
SYNE4Q8N205 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE4Q8N205 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE4Q8N205 MTND4P21-201ENST00000453886 1357 ntBASIC6.95□□□□□ -1.3
SYNE4Q8N205 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE4Q8N205 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE4Q8N205 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE4Q8N205 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE4Q8N205 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE4Q8N205 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE4Q8N205 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE4Q8N205 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.94□□□□□ -1.3
SYNE4Q8N205 SNORA70H-201ENST00000383910 135 ntBASIC6.94□□□□□ -1.3
SYNE4Q8N205 SNORA70J-201ENST00000384182 135 ntBASIC6.94□□□□□ -1.3
SYNE4Q8N205 AL133388.1-201ENST00000404509 287 ntBASIC6.94□□□□□ -1.3
SYNE4Q8N205 SNORA11-201ENST00000408789 128 ntBASIC6.94□□□□□ -1.3
SYNE4Q8N205 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC6.94□□□□□ -1.3
SYNE4Q8N205 AC007161.1-204ENST00000423039 460 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 574.5 ms