Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 MIR3154-201ENST00000577829 84 ntBASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 AC015818.6-201ENST00000584274 634 ntBASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 AC004987.4-201ENST00000603383 338 ntBASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 AC080078.2-201ENST00000603766 501 ntBASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 AL683813.2-201ENST00000605245 502 ntBASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 AC013468.1-201ENST00000608680 598 ntBASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 AC103591.3-201ENST00000608684 209 ntBASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 AC245297.2-201ENST00000610119 565 ntBASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 AC015660.5-201ENST00000623238 564 ntBASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 API5P1-201ENST00000424316 1510 ntBASIC6.34□□□□□ -1.39
TRIM48Q8IWZ4 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.34□□□□□ -1.4
TRIM48Q8IWZ4 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
TRIM48Q8IWZ4 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.34□□□□□ -1.4
TRIM48Q8IWZ4 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
TRIM48Q8IWZ4 AC139426.3-201ENST00000605648 2059 ntBASIC6.34□□□□□ -1.4
TRIM48Q8IWZ4 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 AC104446.1-201ENST00000613728 1321 ntBASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 AC062029.1-202ENST00000606164 3651 ntBASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 Y_RNA.194-201ENST00000363985 102 ntBASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 RNA5SP77-201ENST00000365394 120 ntBASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 ATP5F1P3-201ENST00000397213 657 ntBASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 ERHP2-201ENST00000402323 299 ntBASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 MTND4LP17-201ENST00000414607 293 ntBASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 RPL7P53-201ENST00000421245 739 ntBASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 EMC3-AS1-205ENST00000438698 534 ntBASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 AC107398.1-201ENST00000486904 505 ntBASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 AC080014.1-201ENST00000496877 1201 ntBASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 NDUFB4P12-201ENST00000513465 390 ntBASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 IGHV3-57-201ENST00000520143 280 ntBASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 VN1R83P-201ENST00000595685 445 ntBASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 AL953862.2-201ENST00000603089 820 ntBASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 AL590229.1-201ENST00000603497 542 ntBASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 AL163642.2-201ENST00000604722 1019 ntBASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 AL392112.1-201ENST00000605115 829 ntBASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 AC009163.6-201ENST00000612367 342 ntBASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 AL445647.2-201ENST00000615170 130 ntBASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 AL121890.3-201ENST00000618494 516 ntBASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 AK6-205ENST00000618980 483 ntTSL 2 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 AL158062.1-201ENST00000619632 745 ntBASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 AP001264.1-201ENST00000620602 703 ntBASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms