Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
NHLRC1Q6VVB1 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
NHLRC1Q6VVB1 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
NHLRC1Q6VVB1 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
NHLRC1Q6VVB1 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
NHLRC1Q6VVB1 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.14□□□□□ -1.59
NHLRC1Q6VVB1 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
NHLRC1Q6VVB1 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NHLRC1Q6VVB1 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
NHLRC1Q6VVB1 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.14□□□□□ -1.59
NHLRC1Q6VVB1 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 NIFKP3-201ENST00000417799 865 ntBASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 OR51A6P-201ENST00000418680 1004 ntBASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 RPS27AP6-201ENST00000427962 448 ntBASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 MRPS33P4-201ENST00000434892 317 ntBASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 AC242426.1-201ENST00000435270 960 ntBASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 RN7SL570P-201ENST00000484405 292 ntBASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 AC090543.1-201ENST00000492168 485 ntBASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 AC111000.6-201ENST00000514471 709 ntBASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 AC063977.5-201ENST00000601044 974 ntBASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 AC074276.2-201ENST00000619891 348 ntBASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 AL162233.1-201ENST00000620014 944 ntBASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 AL118508.4-201ENST00000624142 1176 ntBASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 AC129915.3-201ENST00000634128 948 ntBASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 AC083899.1-201ENST00000454465 3819 ntBASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 AC006206.1-201ENST00000544842 3387 ntBASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 AC239868.2-201ENST00000564237 4527 ntBASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NHLRC1Q6VVB1 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
NHLRC1Q6VVB1 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.12□□□□□ -1.59
NHLRC1Q6VVB1 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.12□□□□□ -1.59
NHLRC1Q6VVB1 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NHLRC1Q6VVB1 OR9K1P-202ENST00000641111 3217 ntBASIC5.12□□□□□ -1.59
NHLRC1Q6VVB1 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NHLRC1Q6VVB1 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.12□□□□□ -1.59
NHLRC1Q6VVB1 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NHLRC1Q6VVB1 AP004607.3-201ENST00000530354 3915 ntBASIC5.12□□□□□ -1.59
NHLRC1Q6VVB1 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
NHLRC1Q6VVB1 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NHLRC1Q6VVB1 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NHLRC1Q6VVB1 OR5T3-201ENST00000303059 1023 ntBASIC5.12□□□□□ -1.59
NHLRC1Q6VVB1 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.12□□□□□ -1.59
NHLRC1Q6VVB1 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NHLRC1Q6VVB1 RNU6-249P-201ENST00000363016 102 ntBASIC5.12□□□□□ -1.59
NHLRC1Q6VVB1 RN7SKP81-201ENST00000365603 331 ntBASIC5.12□□□□□ -1.59
NHLRC1Q6VVB1 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NHLRC1Q6VVB1 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
NHLRC1Q6VVB1 AC002524.1-201ENST00000411687 547 ntBASIC5.12□□□□□ -1.59
NHLRC1Q6VVB1 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.12□□□□□ -1.59
NHLRC1Q6VVB1 VN1R21P-201ENST00000426703 765 ntBASIC5.12□□□□□ -1.59
NHLRC1Q6VVB1 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.12□□□□□ -1.59
NHLRC1Q6VVB1 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms