Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 TEK-204ENST00000519097 3836 ntTSL 2 BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 AL078621.3-201ENST00000623707 2042 ntBASIC5.25□□□□□ -1.57
RIF1Q5UIP0 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 HSPA8P15-201ENST00000401676 786 ntBASIC5.25□□□□□ -1.57
RIF1Q5UIP0 ELOCP19-201ENST00000411919 318 ntBASIC5.25□□□□□ -1.57
RIF1Q5UIP0 OR13K1P-201ENST00000444577 975 ntBASIC5.25□□□□□ -1.57
RIF1Q5UIP0 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 MTND6P2-201ENST00000512226 524 ntBASIC5.25□□□□□ -1.57
RIF1Q5UIP0 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.25□□□□□ -1.57
RIF1Q5UIP0 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 RNU1-64P-201ENST00000365443 163 ntBASIC5.24□□□□□ -1.57
RIF1Q5UIP0 AL139039.2-201ENST00000407436 479 ntBASIC5.24□□□□□ -1.57
RIF1Q5UIP0 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 A2MP1-204ENST00000566278 4130 ntBASIC5.24□□□□□ -1.57
RIF1Q5UIP0 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 HMGB3P7-201ENST00000400214 611 ntBASIC5.24□□□□□ -1.57
RIF1Q5UIP0 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.24□□□□□ -1.57
RIF1Q5UIP0 NPM1P33-201ENST00000438918 872 ntBASIC5.24□□□□□ -1.57
RIF1Q5UIP0 AC112498.1-201ENST00000444401 332 ntBASIC5.24□□□□□ -1.57
RIF1Q5UIP0 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 AC011944.2-201ENST00000624440 683 ntBASIC5.24□□□□□ -1.57
RIF1Q5UIP0 AC074101.1-201ENST00000637861 241 ntBASIC5.24□□□□□ -1.57
RIF1Q5UIP0 OR8B1P-202ENST00000641132 1178 ntBASIC5.24□□□□□ -1.57
RIF1Q5UIP0 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 AL133243.4-201ENST00000623116 3109 ntBASIC5.24□□□□□ -1.57
RIF1Q5UIP0 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
RIF1Q5UIP0 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RIF1Q5UIP0 AL132640.2-201ENST00000559968 1698 ntBASIC5.23□□□□□ -1.57
RIF1Q5UIP0 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC5.23□□□□□ -1.57
RIF1Q5UIP0 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RIF1Q5UIP0 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RIF1Q5UIP0 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
RIF1Q5UIP0 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RIF1Q5UIP0 RNU4-39P-201ENST00000362455 127 ntBASIC5.23□□□□□ -1.57
RIF1Q5UIP0 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.23□□□□□ -1.57
RIF1Q5UIP0 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.23□□□□□ -1.57
RIF1Q5UIP0 AC011005.3-201ENST00000491624 395 ntBASIC5.23□□□□□ -1.57
RIF1Q5UIP0 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.23□□□□□ -1.57
RIF1Q5UIP0 AC093227.2-201ENST00000589357 285 ntBASIC5.23□□□□□ -1.57
RIF1Q5UIP0 AP003789.1-201ENST00000617737 605 ntBASIC5.23□□□□□ -1.57
RIF1Q5UIP0 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RIF1Q5UIP0 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.23□□□□□ -1.57
RIF1Q5UIP0 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RIF1Q5UIP0 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.23□□□□□ -1.57
RIF1Q5UIP0 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RIF1Q5UIP0 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RIF1Q5UIP0 BX284613.1-201ENST00000452221 1641 ntBASIC5.23□□□□□ -1.57
RIF1Q5UIP0 MT-RNR2-201ENST00000387347 1559 ntBASIC5.23□□□□□ -1.57
RIF1Q5UIP0 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RIF1Q5UIP0 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms