Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 AL359757.1-201ENST00000623176 255 ntBASIC8.61□□□□□ -1.03
SNAPC4Q5SXM2 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
SNAPC4Q5SXM2 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SNAPC4Q5SXM2 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC8.61□□□□□ -1.03
SNAPC4Q5SXM2 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC8.61□□□□□ -1.03
SNAPC4Q5SXM2 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SNAPC4Q5SXM2 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC8.6□□□□□ -1.03
SNAPC4Q5SXM2 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SNAPC4Q5SXM2 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SNAPC4Q5SXM2 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SNAPC4Q5SXM2 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
SNAPC4Q5SXM2 RNGTTP1-201ENST00000420965 728 ntBASIC8.6□□□□□ -1.03
SNAPC4Q5SXM2 AL390879.1-201ENST00000439143 386 ntBASIC8.6□□□□□ -1.03
SNAPC4Q5SXM2 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC8.6□□□□□ -1.03
SNAPC4Q5SXM2 RPL10P17-201ENST00000453852 316 ntBASIC8.6□□□□□ -1.03
SNAPC4Q5SXM2 AC026402.1-201ENST00000513642 170 ntBASIC8.6□□□□□ -1.03
SNAPC4Q5SXM2 SNORA70.11-201ENST00000515987 138 ntBASIC8.6□□□□□ -1.03
SNAPC4Q5SXM2 SNORA70.13-201ENST00000516116 138 ntBASIC8.6□□□□□ -1.03
SNAPC4Q5SXM2 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC8.6□□□□□ -1.03
SNAPC4Q5SXM2 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC8.6□□□□□ -1.03
SNAPC4Q5SXM2 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
SNAPC4Q5SXM2 AC104162.1-201ENST00000430831 2382 ntBASIC8.6□□□□□ -1.03
SNAPC4Q5SXM2 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC8.6□□□□□ -1.03
SNAPC4Q5SXM2 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SNAPC4Q5SXM2 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
SNAPC4Q5SXM2 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SNAPC4Q5SXM2 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC8.6□□□□□ -1.03
SNAPC4Q5SXM2 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC8.6□□□□□ -1.03
SNAPC4Q5SXM2 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
SNAPC4Q5SXM2 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC8.6□□□□□ -1.03
SNAPC4Q5SXM2 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SNAPC4Q5SXM2 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC8.6□□□□□ -1.03
SNAPC4Q5SXM2 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SNAPC4Q5SXM2 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SNAPC4Q5SXM2 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SNAPC4Q5SXM2 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
SNAPC4Q5SXM2 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SNAPC4Q5SXM2 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC8.59□□□□□ -1.03
SNAPC4Q5SXM2 ATP5A1P4-201ENST00000556888 1605 ntBASIC8.59□□□□□ -1.03
SNAPC4Q5SXM2 EEF1A1P33-201ENST00000554413 1362 ntBASIC8.59□□□□□ -1.03
SNAPC4Q5SXM2 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
SNAPC4Q5SXM2 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC8.59□□□□□ -1.03
SNAPC4Q5SXM2 RPS3AP23-201ENST00000401762 784 ntBASIC8.59□□□□□ -1.03
SNAPC4Q5SXM2 MIR1193-201ENST00000408109 78 ntBASIC8.59□□□□□ -1.03
SNAPC4Q5SXM2 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC8.59□□□□□ -1.03
SNAPC4Q5SXM2 TRIM60P9Y-201ENST00000438459 816 ntBASIC8.59□□□□□ -1.03
SNAPC4Q5SXM2 TRIM60P11Y-201ENST00000445313 801 ntBASIC8.59□□□□□ -1.03
SNAPC4Q5SXM2 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SNAPC4Q5SXM2 GAPDHP56-201ENST00000506031 988 ntBASIC8.59□□□□□ -1.03
SNAPC4Q5SXM2 AC093824.1-201ENST00000508796 343 ntBASIC8.59□□□□□ -1.03
SNAPC4Q5SXM2 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC8.59□□□□□ -1.03
SNAPC4Q5SXM2 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC8.59□□□□□ -1.03
SNAPC4Q5SXM2 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC8.59□□□□□ -1.03
SNAPC4Q5SXM2 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC8.59□□□□□ -1.03
SNAPC4Q5SXM2 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC8.59□□□□□ -1.03
SNAPC4Q5SXM2 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC8.59□□□□□ -1.03
SNAPC4Q5SXM2 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SNAPC4Q5SXM2 AC005252.1-201ENST00000604518 1063 ntBASIC8.59□□□□□ -1.03
SNAPC4Q5SXM2 AC006338.2-201ENST00000616864 791 ntBASIC8.59□□□□□ -1.03
SNAPC4Q5SXM2 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SNAPC4Q5SXM2 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SNAPC4Q5SXM2 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC8.59□□□□□ -1.03
SNAPC4Q5SXM2 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC8.59□□□□□ -1.04
SNAPC4Q5SXM2 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC8.59□□□□□ -1.04
SNAPC4Q5SXM2 SNORD56.6-201ENST00000384569 71 ntBASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 SNX10-203ENST00000409367 746 ntTSL 5 BASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 RIMKLBP2-201ENST00000424737 654 ntBASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 MRPS33P2-201ENST00000507850 322 ntBASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 RGS5-219ENST00000528019 512 ntTSL 4 BASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 AC009237.13-201ENST00000603193 276 ntBASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 AL133481.2-203ENST00000607558 139 ntBASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 UGP2-232ENST00000640075 567 ntTSL 5 BASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 HYDIN2-203ENST00000614586 13885 ntBASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC8.58□□□□□ -1.04
SNAPC4Q5SXM2 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC8.58□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms