Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 FRG1EP-201ENST00000634469 770 ntBASIC5.14□□□□□ -1.59
SCN1BQ07699 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.14□□□□□ -1.59
SCN1BQ07699 AL353796.1-201ENST00000561542 3241 ntBASIC5.14□□□□□ -1.59
SCN1BQ07699 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.14□□□□□ -1.59
SCN1BQ07699 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.14□□□□□ -1.59
SCN1BQ07699 AC022417.1-201ENST00000624768 1303 ntBASIC5.14□□□□□ -1.59
SCN1BQ07699 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SCN1BQ07699 AC011755.1-201ENST00000623763 2049 ntBASIC5.14□□□□□ -1.59
SCN1BQ07699 SMG1P4-204ENST00000523028 4131 ntBASIC5.14□□□□□ -1.59
SCN1BQ07699 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.14□□□□□ -1.59
SCN1BQ07699 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.14□□□□□ -1.59
SCN1BQ07699 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SCN1BQ07699 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SCN1BQ07699 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SCN1BQ07699 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
SCN1BQ07699 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SCN1BQ07699 AL360270.2-201ENST00000562952 5985 ntBASIC5.13□□□□□ -1.59
SCN1BQ07699 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SCN1BQ07699 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SCN1BQ07699 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SCN1BQ07699 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SCN1BQ07699 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SCN1BQ07699 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SCN1BQ07699 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.13□□□□□ -1.59
SCN1BQ07699 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SCN1BQ07699 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SCN1BQ07699 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SCN1BQ07699 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SCN1BQ07699 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.13□□□□□ -1.59
SCN1BQ07699 MIR551B-201ENST00000384984 96 ntBASIC5.13□□□□□ -1.59
SCN1BQ07699 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.13□□□□□ -1.59
SCN1BQ07699 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.13□□□□□ -1.59
SCN1BQ07699 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.13□□□□□ -1.59
SCN1BQ07699 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.13□□□□□ -1.59
SCN1BQ07699 AC006455.6-201ENST00000426192 893 ntBASIC5.13□□□□□ -1.59
SCN1BQ07699 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.13□□□□□ -1.59
SCN1BQ07699 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.13□□□□□ -1.59
SCN1BQ07699 BX119321.1-201ENST00000428912 797 ntBASIC5.13□□□□□ -1.59
SCN1BQ07699 AC096775.1-201ENST00000437724 448 ntBASIC5.13□□□□□ -1.59
SCN1BQ07699 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SCN1BQ07699 AL691517.1-201ENST00000440833 1235 ntBASIC5.13□□□□□ -1.59
SCN1BQ07699 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
SCN1BQ07699 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.13□□□□□ -1.59
SCN1BQ07699 RPS15AP29-201ENST00000445539 400 ntBASIC5.13□□□□□ -1.59
SCN1BQ07699 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.13□□□□□ -1.59
SCN1BQ07699 RPS27P20-201ENST00000492051 246 ntBASIC5.13□□□□□ -1.59
SCN1BQ07699 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.13□□□□□ -1.59
SCN1BQ07699 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.13□□□□□ -1.59
SCN1BQ07699 SNX18P25-201ENST00000510539 758 ntBASIC5.13□□□□□ -1.59
SCN1BQ07699 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.13□□□□□ -1.59
SCN1BQ07699 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.13□□□□□ -1.59
SCN1BQ07699 IGLV3-24-201ENST00000517477 197 ntBASIC5.13□□□□□ -1.59
SCN1BQ07699 AC021269.1-201ENST00000526860 705 ntBASIC5.13□□□□□ -1.59
SCN1BQ07699 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.13□□□□□ -1.59
SCN1BQ07699 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.13□□□□□ -1.59
SCN1BQ07699 NOP56P3-201ENST00000549457 385 ntBASIC5.13□□□□□ -1.59
SCN1BQ07699 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.13□□□□□ -1.59
SCN1BQ07699 LSM3P2-201ENST00000551246 273 ntBASIC5.13□□□□□ -1.59
SCN1BQ07699 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.13□□□□□ -1.59
SCN1BQ07699 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.13□□□□□ -1.59
SCN1BQ07699 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.13□□□□□ -1.59
SCN1BQ07699 NMNAT1P5-201ENST00000559657 841 ntBASIC5.13□□□□□ -1.59
SCN1BQ07699 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
SCN1BQ07699 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.13□□□□□ -1.59
SCN1BQ07699 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.13□□□□□ -1.59
SCN1BQ07699 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.13□□□□□ -1.59
SCN1BQ07699 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.13□□□□□ -1.59
SCN1BQ07699 HIRAP1-201ENST00000605318 787 ntBASIC5.13□□□□□ -1.59
SCN1BQ07699 AL355802.4-201ENST00000607635 548 ntBASIC5.13□□□□□ -1.59
SCN1BQ07699 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.13□□□□□ -1.59
SCN1BQ07699 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.13□□□□□ -1.59
SCN1BQ07699 AC092681.3-201ENST00000609463 678 ntBASIC5.13□□□□□ -1.59
SCN1BQ07699 AL391834.1-201ENST00000609609 560 ntBASIC5.13□□□□□ -1.59
SCN1BQ07699 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.13□□□□□ -1.59
SCN1BQ07699 uc_338.26-201ENST00000612659 160 ntBASIC5.13□□□□□ -1.59
SCN1BQ07699 AC012676.3-201ENST00000614983 479 ntBASIC5.13□□□□□ -1.59
SCN1BQ07699 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.13□□□□□ -1.59
SCN1BQ07699 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.13□□□□□ -1.59
SCN1BQ07699 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.13□□□□□ -1.59
SCN1BQ07699 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.13□□□□□ -1.59
SCN1BQ07699 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SCN1BQ07699 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SCN1BQ07699 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.13□□□□□ -1.59
SCN1BQ07699 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SCN1BQ07699 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
SCN1BQ07699 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SCN1BQ07699 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.13□□□□□ -1.59
SCN1BQ07699 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SCN1BQ07699 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SCN1BQ07699 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SCN1BQ07699 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SCN1BQ07699 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.13□□□□□ -1.59
SCN1BQ07699 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.12□□□□□ -1.59
SCN1BQ07699 AC007382.1-201ENST00000624376 2618 ntBASIC5.12□□□□□ -1.59
SCN1BQ07699 AF287957.1-201ENST00000607368 1595 ntBASIC5.12□□□□□ -1.59
SCN1BQ07699 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
SCN1BQ07699 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.12□□□□□ -1.59
SCN1BQ07699 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SCN1BQ07699 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.12□□□□□ -1.59
SCN1BQ07699 MRRFP1-201ENST00000435941 1675 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms