Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.45□□□□□ -1.7
SSBP1Q04837 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SSBP1Q04837 VDAC2P4-201ENST00000452925 711 ntBASIC4.45□□□□□ -1.7
SSBP1Q04837 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC4.45□□□□□ -1.7
SSBP1Q04837 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC4.45□□□□□ -1.7
SSBP1Q04837 RN7SL423P-201ENST00000486202 304 ntBASIC4.45□□□□□ -1.7
SSBP1Q04837 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.45□□□□□ -1.7
SSBP1Q04837 RN7SKP35-201ENST00000517210 151 ntBASIC4.45□□□□□ -1.7
SSBP1Q04837 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.45□□□□□ -1.7
SSBP1Q04837 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.45□□□□□ -1.7
SSBP1Q04837 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.45□□□□□ -1.7
SSBP1Q04837 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.45□□□□□ -1.7
SSBP1Q04837 AC012616.1-201ENST00000600294 197 ntBASIC4.45□□□□□ -1.7
SSBP1Q04837 WBP1LP12-201ENST00000604449 331 ntBASIC4.45□□□□□ -1.7
SSBP1Q04837 AL049840.6-201ENST00000604583 345 ntBASIC4.45□□□□□ -1.7
SSBP1Q04837 uc_338.31-201ENST00000615595 186 ntBASIC4.45□□□□□ -1.7
SSBP1Q04837 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SSBP1Q04837 MTCO1P1-201ENST00000624263 1081 ntBASIC4.45□□□□□ -1.7
SSBP1Q04837 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
SSBP1Q04837 AC008691.1-209ENST00000642094 814 ntBASIC4.45□□□□□ -1.7
SSBP1Q04837 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SSBP1Q04837 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SSBP1Q04837 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.45□□□□□ -1.7
SSBP1Q04837 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
SSBP1Q04837 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.45□□□□□ -1.7
SSBP1Q04837 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP1Q04837 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP1Q04837 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP1Q04837 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.44□□□□□ -1.7
SSBP1Q04837 OR55B1P-203ENST00000641518 2602 ntBASIC4.44□□□□□ -1.7
SSBP1Q04837 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.44□□□□□ -1.7
SSBP1Q04837 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP1Q04837 EIF3EP2-201ENST00000423042 1814 ntBASIC4.44□□□□□ -1.7
SSBP1Q04837 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.44□□□□□ -1.7
SSBP1Q04837 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP1Q04837 CASC19-221ENST00000641309 1382 ntBASIC4.44□□□□□ -1.7
SSBP1Q04837 AC093849.1-201ENST00000563631 2209 ntBASIC4.44□□□□□ -1.7
SSBP1Q04837 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.44□□□□□ -1.7
SSBP1Q04837 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP1Q04837 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SSBP1Q04837 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SSBP1Q04837 RNU1-150P-201ENST00000362491 162 ntBASIC4.44□□□□□ -1.7
SSBP1Q04837 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.44□□□□□ -1.7
SSBP1Q04837 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP1Q04837 AL035079.1-201ENST00000405210 287 ntBASIC4.44□□□□□ -1.7
SSBP1Q04837 RN7SKP38-201ENST00000410782 309 ntBASIC4.44□□□□□ -1.7
SSBP1Q04837 OR6C64P-201ENST00000419708 825 ntBASIC4.44□□□□□ -1.7
SSBP1Q04837 AL139148.1-201ENST00000427122 680 ntBASIC4.44□□□□□ -1.7
SSBP1Q04837 AC092646.1-201ENST00000427142 901 ntBASIC4.44□□□□□ -1.7
SSBP1Q04837 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.44□□□□□ -1.7
SSBP1Q04837 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.44□□□□□ -1.7
SSBP1Q04837 CLUHP1-201ENST00000435012 1190 ntBASIC4.44□□□□□ -1.7
SSBP1Q04837 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.44□□□□□ -1.7
SSBP1Q04837 GAPDHP59-201ENST00000435908 267 ntBASIC4.44□□□□□ -1.7
SSBP1Q04837 MRPL48P1-201ENST00000445390 636 ntBASIC4.44□□□□□ -1.7
SSBP1Q04837 AL450996.1-201ENST00000445574 1202 ntBASIC4.44□□□□□ -1.7
SSBP1Q04837 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC4.44□□□□□ -1.7
SSBP1Q04837 GAPDHP25-201ENST00000447061 1001 ntBASIC4.44□□□□□ -1.7
SSBP1Q04837 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.44□□□□□ -1.7
SSBP1Q04837 AL356981.1-201ENST00000454879 684 ntBASIC4.44□□□□□ -1.7
SSBP1Q04837 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC4.44□□□□□ -1.7
SSBP1Q04837 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC4.44□□□□□ -1.7
SSBP1Q04837 CST12P-201ENST00000457644 362 ntBASIC4.44□□□□□ -1.7
SSBP1Q04837 AC004890.1-201ENST00000461005 181 ntBASIC4.44□□□□□ -1.7
SSBP1Q04837 AC005412.2-201ENST00000492004 341 ntBASIC4.44□□□□□ -1.7
SSBP1Q04837 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC4.44□□□□□ -1.7
SSBP1Q04837 BCAS2P1-201ENST00000528022 632 ntBASIC4.44□□□□□ -1.7
SSBP1Q04837 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC4.44□□□□□ -1.7
SSBP1Q04837 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.44□□□□□ -1.7
SSBP1Q04837 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.44□□□□□ -1.7
SSBP1Q04837 RN7SL66P-201ENST00000582099 264 ntBASIC4.44□□□□□ -1.7
SSBP1Q04837 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.44□□□□□ -1.7
SSBP1Q04837 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.44□□□□□ -1.7
SSBP1Q04837 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC4.44□□□□□ -1.7
SSBP1Q04837 Z95327.3-201ENST00000610385 572 ntBASIC4.44□□□□□ -1.7
SSBP1Q04837 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC4.44□□□□□ -1.7
SSBP1Q04837 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC4.44□□□□□ -1.7
SSBP1Q04837 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC4.44□□□□□ -1.7
SSBP1Q04837 AC087565.3-203ENST00000641018 837 ntBASIC4.44□□□□□ -1.7
SSBP1Q04837 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP1Q04837 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP1Q04837 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP1Q04837 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP1Q04837 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.44□□□□□ -1.7
SSBP1Q04837 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP1Q04837 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP1Q04837 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSBP1Q04837 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.43□□□□□ -1.7
SSBP1Q04837 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
SSBP1Q04837 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSBP1Q04837 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSBP1Q04837 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.43□□□□□ -1.7
SSBP1Q04837 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.43□□□□□ -1.7
SSBP1Q04837 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSBP1Q04837 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
SSBP1Q04837 U3.32-201ENST00000408116 212 ntBASIC4.43□□□□□ -1.7
SSBP1Q04837 AL035660.1-201ENST00000422041 222 ntBASIC4.43□□□□□ -1.7
SSBP1Q04837 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.43□□□□□ -1.7
SSBP1Q04837 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.43□□□□□ -1.7
SSBP1Q04837 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 153.5 ms