Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC092954.1-201ENST00000609121 445 ntBASIC5.73□□□□□ -1.49
NKX6-1P78426 AL365181.4-201ENST00000609800 547 ntBASIC5.73□□□□□ -1.49
NKX6-1P78426 AP000894.4-201ENST00000610185 483 ntBASIC5.73□□□□□ -1.49
NKX6-1P78426 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NKX6-1P78426 U1.41-201ENST00000617626 165 ntBASIC5.73□□□□□ -1.49
NKX6-1P78426 OR1N1-202ENST00000619659 939 ntBASIC5.73□□□□□ -1.49
NKX6-1P78426 AC091304.6-201ENST00000619761 202 ntBASIC5.73□□□□□ -1.49
NKX6-1P78426 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NKX6-1P78426 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NKX6-1P78426 AL390318.1-201ENST00000624564 687 ntBASIC5.73□□□□□ -1.49
NKX6-1P78426 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.73□□□□□ -1.49
NKX6-1P78426 AL121594.5-201ENST00000631724 573 ntBASIC5.73□□□□□ -1.49
NKX6-1P78426 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NKX6-1P78426 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
NKX6-1P78426 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
NKX6-1P78426 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
NKX6-1P78426 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC5.73□□□□□ -1.49
NKX6-1P78426 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NKX6-1P78426 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NKX6-1P78426 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NKX6-1P78426 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NKX6-1P78426 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NKX6-1P78426 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
NKX6-1P78426 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
NKX6-1P78426 VPS35P1-201ENST00000563400 1518 ntBASIC5.73□□□□□ -1.49
NKX6-1P78426 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
NKX6-1P78426 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NKX6-1P78426 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.73□□□□□ -1.49
NKX6-1P78426 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
NKX6-1P78426 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.73□□□□□ -1.49
NKX6-1P78426 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
NKX6-1P78426 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC5.72□□□□□ -1.49
NKX6-1P78426 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NKX6-1P78426 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC5.72□□□□□ -1.49
NKX6-1P78426 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC5.72□□□□□ -1.49
NKX6-1P78426 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.72□□□□□ -1.49
NKX6-1P78426 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NKX6-1P78426 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC5.72□□□□□ -1.49
NKX6-1P78426 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC5.72□□□□□ -1.49
NKX6-1P78426 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NKX6-1P78426 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NKX6-1P78426 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NKX6-1P78426 RNA5SP77-201ENST00000365394 120 ntBASIC5.72□□□□□ -1.49
NKX6-1P78426 Y_RNA.472-201ENST00000384322 102 ntBASIC5.72□□□□□ -1.49
NKX6-1P78426 LRRC37BP1-201ENST00000398851 714 ntBASIC5.72□□□□□ -1.49
NKX6-1P78426 FCF1P5-201ENST00000406490 482 ntBASIC5.72□□□□□ -1.49
NKX6-1P78426 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.72□□□□□ -1.49
NKX6-1P78426 RN7SKP222-201ENST00000410651 315 ntBASIC5.72□□□□□ -1.49
NKX6-1P78426 RANP6-201ENST00000413691 644 ntBASIC5.72□□□□□ -1.49
NKX6-1P78426 AL929472.1-201ENST00000417484 429 ntBASIC5.72□□□□□ -1.49
NKX6-1P78426 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NKX6-1P78426 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.72□□□□□ -1.49
NKX6-1P78426 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.72□□□□□ -1.49
NKX6-1P78426 MTND5P25-201ENST00000430499 799 ntBASIC5.72□□□□□ -1.49
NKX6-1P78426 YWHAEP5-201ENST00000431545 765 ntBASIC5.72□□□□□ -1.49
NKX6-1P78426 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.72□□□□□ -1.49
NKX6-1P78426 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.72□□□□□ -1.49
NKX6-1P78426 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.72□□□□□ -1.49
NKX6-1P78426 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC5.72□□□□□ -1.49
NKX6-1P78426 AC110749.1-201ENST00000462007 357 ntBASIC5.72□□□□□ -1.49
NKX6-1P78426 AC096741.1-201ENST00000472250 846 ntBASIC5.72□□□□□ -1.49
NKX6-1P78426 AC037198.2-201ENST00000478845 733 ntBASIC5.72□□□□□ -1.49
NKX6-1P78426 AC087672.1-201ENST00000479876 766 ntBASIC5.72□□□□□ -1.49
NKX6-1P78426 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.72□□□□□ -1.49
NKX6-1P78426 CREM-242ENST00000490511 469 ntTSL 2 BASIC5.72□□□□□ -1.49
NKX6-1P78426 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
NKX6-1P78426 RPL17P2-201ENST00000491913 451 ntBASIC5.72□□□□□ -1.49
NKX6-1P78426 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC5.72□□□□□ -1.49
NKX6-1P78426 AC093870.1-201ENST00000506837 213 ntBASIC5.72□□□□□ -1.49
NKX6-1P78426 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.72□□□□□ -1.49
NKX6-1P78426 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.72□□□□□ -1.49
NKX6-1P78426 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.72□□□□□ -1.49
NKX6-1P78426 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.72□□□□□ -1.49
NKX6-1P78426 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.72□□□□□ -1.49
NKX6-1P78426 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.72□□□□□ -1.49
NKX6-1P78426 OR5AM1P-201ENST00000532136 1032 ntBASIC5.72□□□□□ -1.49
NKX6-1P78426 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.72□□□□□ -1.49
NKX6-1P78426 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.72□□□□□ -1.49
NKX6-1P78426 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.72□□□□□ -1.49
NKX6-1P78426 POLR2KP1-201ENST00000553226 168 ntBASIC5.72□□□□□ -1.49
NKX6-1P78426 AC026956.1-201ENST00000558741 396 ntBASIC5.72□□□□□ -1.49
NKX6-1P78426 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.72□□□□□ -1.49
NKX6-1P78426 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.72□□□□□ -1.49
NKX6-1P78426 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NKX6-1P78426 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.72□□□□□ -1.49
NKX6-1P78426 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.72□□□□□ -1.49
NKX6-1P78426 AC009948.4-201ENST00000604692 675 ntBASIC5.72□□□□□ -1.49
NKX6-1P78426 AC005899.7-201ENST00000618199 588 ntBASIC5.72□□□□□ -1.49
NKX6-1P78426 AL354718.1-201ENST00000619764 589 ntBASIC5.72□□□□□ -1.49
NKX6-1P78426 AP003485.2-201ENST00000623636 610 ntBASIC5.72□□□□□ -1.49
NKX6-1P78426 BX649567.1-201ENST00000642071 1134 ntBASIC5.72□□□□□ -1.49
NKX6-1P78426 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NKX6-1P78426 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.72□□□□□ -1.49
NKX6-1P78426 CASC19-284ENST00000642142 1868 ntBASIC5.72□□□□□ -1.49
NKX6-1P78426 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NKX6-1P78426 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
NKX6-1P78426 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.72□□□□□ -1.49
NKX6-1P78426 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC5.72□□□□□ -1.49
NKX6-1P78426 AC074141.1-201ENST00000588129 2995 ntBASIC5.72□□□□□ -1.49
NKX6-1P78426 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms