Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
UBA52P62987 PFN1P6-201ENST00000476786 399 ntBASIC4.79□□□□□ -1.64
UBA52P62987 NENFP3-201ENST00000503735 313 ntBASIC4.79□□□□□ -1.64
UBA52P62987 AC098976.1-201ENST00000513014 541 ntBASIC4.79□□□□□ -1.64
UBA52P62987 AC021146.10-201ENST00000515628 706 ntBASIC4.79□□□□□ -1.64
UBA52P62987 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC4.79□□□□□ -1.64
UBA52P62987 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.79□□□□□ -1.64
UBA52P62987 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC4.79□□□□□ -1.64
UBA52P62987 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
UBA52P62987 RN7SL290P-201ENST00000578661 300 ntBASIC4.79□□□□□ -1.64
UBA52P62987 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.79□□□□□ -1.64
UBA52P62987 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.79□□□□□ -1.64
UBA52P62987 AC015802.2-201ENST00000589690 189 ntBASIC4.79□□□□□ -1.64
UBA52P62987 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
UBA52P62987 AC008536.1-201ENST00000602872 669 ntBASIC4.79□□□□□ -1.64
UBA52P62987 AL021707.7-201ENST00000607991 416 ntBASIC4.79□□□□□ -1.64
UBA52P62987 uc_338.26-201ENST00000612659 160 ntBASIC4.79□□□□□ -1.64
UBA52P62987 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
UBA52P62987 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
UBA52P62987 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.79□□□□□ -1.64
UBA52P62987 AC083899.1-201ENST00000454465 3819 ntBASIC4.79□□□□□ -1.64
UBA52P62987 AC139426.3-201ENST00000605648 2059 ntBASIC4.79□□□□□ -1.64
UBA52P62987 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
UBA52P62987 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
UBA52P62987 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
UBA52P62987 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
UBA52P62987 AC144833.1-201ENST00000567953 4089 ntBASIC4.78□□□□□ -1.64
UBA52P62987 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.78□□□□□ -1.64
UBA52P62987 ZNF652P1-201ENST00000442420 1309 ntBASIC4.78□□□□□ -1.64
UBA52P62987 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
UBA52P62987 AL731566.1-201ENST00000620490 1937 ntBASIC4.78□□□□□ -1.64
UBA52P62987 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
UBA52P62987 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
UBA52P62987 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
UBA52P62987 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
UBA52P62987 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
UBA52P62987 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.78□□□□□ -1.64
UBA52P62987 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.78□□□□□ -1.64
UBA52P62987 SELENOWP1-201ENST00000322792 252 ntBASIC4.78□□□□□ -1.64
UBA52P62987 RNA5SP46-201ENST00000362370 120 ntBASIC4.78□□□□□ -1.64
UBA52P62987 RNA5SP500-201ENST00000364486 119 ntBASIC4.78□□□□□ -1.64
UBA52P62987 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
UBA52P62987 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.78□□□□□ -1.64
UBA52P62987 RN7SKP97-201ENST00000410966 333 ntBASIC4.78□□□□□ -1.64
UBA52P62987 AC017078.1-201ENST00000416146 368 ntBASIC4.78□□□□□ -1.64
UBA52P62987 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.78□□□□□ -1.64
UBA52P62987 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.78□□□□□ -1.64
UBA52P62987 TAAR4P-201ENST00000454843 1039 ntBASIC4.78□□□□□ -1.64
UBA52P62987 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.78□□□□□ -1.64
UBA52P62987 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.78□□□□□ -1.64
UBA52P62987 GAPDHP71-201ENST00000511530 1003 ntBASIC4.78□□□□□ -1.64
UBA52P62987 AC021193.1-201ENST00000511607 420 ntBASIC4.78□□□□□ -1.64
UBA52P62987 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.78□□□□□ -1.64
UBA52P62987 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.78□□□□□ -1.64
UBA52P62987 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.78□□□□□ -1.64
UBA52P62987 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC4.78□□□□□ -1.64
UBA52P62987 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.78□□□□□ -1.64
UBA52P62987 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.78□□□□□ -1.64
UBA52P62987 AC091932.2-201ENST00000623014 291 ntBASIC4.78□□□□□ -1.64
UBA52P62987 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.78□□□□□ -1.64
UBA52P62987 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.78□□□□□ -1.64
UBA52P62987 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
UBA52P62987 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
UBA52P62987 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
UBA52P62987 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
UBA52P62987 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
UBA52P62987 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
UBA52P62987 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.78□□□□□ -1.64
UBA52P62987 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
UBA52P62987 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
UBA52P62987 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
UBA52P62987 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
UBA52P62987 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
UBA52P62987 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
UBA52P62987 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
UBA52P62987 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC4.77□□□□□ -1.65
UBA52P62987 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
UBA52P62987 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
UBA52P62987 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
UBA52P62987 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
UBA52P62987 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
UBA52P62987 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
UBA52P62987 GAPDHP24-201ENST00000328713 983 ntBASIC4.77□□□□□ -1.65
UBA52P62987 RNA5SP211-201ENST00000365516 117 ntBASIC4.77□□□□□ -1.65
UBA52P62987 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
UBA52P62987 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
UBA52P62987 RNA5SP241-201ENST00000391326 114 ntBASIC4.77□□□□□ -1.65
UBA52P62987 HMGB1P20-201ENST00000402555 677 ntBASIC4.77□□□□□ -1.65
UBA52P62987 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC4.77□□□□□ -1.65
UBA52P62987 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.77□□□□□ -1.65
UBA52P62987 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.77□□□□□ -1.65
UBA52P62987 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.77□□□□□ -1.65
UBA52P62987 AC127526.2-201ENST00000426436 775 ntBASIC4.77□□□□□ -1.65
UBA52P62987 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.77□□□□□ -1.65
UBA52P62987 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC4.77□□□□□ -1.65
UBA52P62987 AL627308.1-201ENST00000435693 821 ntBASIC4.77□□□□□ -1.65
UBA52P62987 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.77□□□□□ -1.65
UBA52P62987 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.77□□□□□ -1.65
UBA52P62987 LRRC37A14P-201ENST00000452297 462 ntBASIC4.77□□□□□ -1.65
UBA52P62987 SDC4P-201ENST00000453285 601 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms