Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 RPL11P3-201ENST00000395256 523 ntBASIC4.6□□□□□ -1.67
LMO4P61968 AL121977.1-201ENST00000401636 979 ntBASIC4.6□□□□□ -1.67
LMO4P61968 RN7SKP279-201ENST00000411383 298 ntBASIC4.6□□□□□ -1.67
LMO4P61968 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.6□□□□□ -1.67
LMO4P61968 RNGTTP1-201ENST00000420965 728 ntBASIC4.6□□□□□ -1.67
LMO4P61968 AC007161.1-204ENST00000423039 460 ntBASIC4.6□□□□□ -1.67
LMO4P61968 MTATP6P17-201ENST00000431030 672 ntBASIC4.6□□□□□ -1.67
LMO4P61968 RAB9AP5-201ENST00000437794 597 ntBASIC4.6□□□□□ -1.67
LMO4P61968 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.6□□□□□ -1.67
LMO4P61968 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.6□□□□□ -1.67
LMO4P61968 CNOT7P2-201ENST00000441051 832 ntBASIC4.6□□□□□ -1.67
LMO4P61968 RAB9AP2-201ENST00000443911 597 ntBASIC4.6□□□□□ -1.67
LMO4P61968 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.6□□□□□ -1.67
LMO4P61968 RN7SL172P-201ENST00000460535 303 ntBASIC4.6□□□□□ -1.67
LMO4P61968 HMGN1P8-201ENST00000463578 288 ntBASIC4.6□□□□□ -1.67
LMO4P61968 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.6□□□□□ -1.67
LMO4P61968 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.6□□□□□ -1.67
LMO4P61968 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.6□□□□□ -1.67
LMO4P61968 HIGD1AP14-201ENST00000507617 282 ntBASIC4.6□□□□□ -1.67
LMO4P61968 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.6□□□□□ -1.67
LMO4P61968 SNORA26.10-201ENST00000516427 141 ntBASIC4.6□□□□□ -1.67
LMO4P61968 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.6□□□□□ -1.67
LMO4P61968 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.6□□□□□ -1.67
LMO4P61968 OR10G5P-201ENST00000532733 358 ntBASIC4.6□□□□□ -1.67
LMO4P61968 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.6□□□□□ -1.67
LMO4P61968 BLZF2P-201ENST00000553776 1130 ntBASIC4.6□□□□□ -1.67
LMO4P61968 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LMO4P61968 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.6□□□□□ -1.67
LMO4P61968 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.6□□□□□ -1.67
LMO4P61968 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.6□□□□□ -1.67
LMO4P61968 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
LMO4P61968 BNIP3P40-201ENST00000596017 556 ntBASIC4.6□□□□□ -1.67
LMO4P61968 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LMO4P61968 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.6□□□□□ -1.67
LMO4P61968 AC068313.1-201ENST00000604028 1008 ntBASIC4.6□□□□□ -1.67
LMO4P61968 AL021707.7-201ENST00000607991 416 ntBASIC4.6□□□□□ -1.67
LMO4P61968 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.6□□□□□ -1.67
LMO4P61968 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.6□□□□□ -1.67
LMO4P61968 UBA3-213ENST00000631029 123 ntTSL 5 BASIC4.6□□□□□ -1.67
LMO4P61968 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.6□□□□□ -1.67
LMO4P61968 SAMMSON-227ENST00000642114 1199 ntBASIC4.6□□□□□ -1.67
LMO4P61968 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC4.6□□□□□ -1.67
LMO4P61968 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.6□□□□□ -1.67
LMO4P61968 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.6□□□□□ -1.67
LMO4P61968 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC4.6□□□□□ -1.67
LMO4P61968 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LMO4P61968 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LMO4P61968 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LMO4P61968 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.6□□□□□ -1.67
LMO4P61968 MT-RNR2-201ENST00000387347 1559 ntBASIC4.6□□□□□ -1.67
LMO4P61968 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LMO4P61968 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LMO4P61968 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LMO4P61968 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LMO4P61968 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
LMO4P61968 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LMO4P61968 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LMO4P61968 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC4.6□□□□□ -1.67
LMO4P61968 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LMO4P61968 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
LMO4P61968 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.6□□□□□ -1.67
LMO4P61968 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LMO4P61968 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
LMO4P61968 AC112255.1-201ENST00000624070 2493 ntBASIC4.6□□□□□ -1.67
LMO4P61968 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
LMO4P61968 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LMO4P61968 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
LMO4P61968 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LMO4P61968 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
LMO4P61968 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LMO4P61968 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
LMO4P61968 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
LMO4P61968 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LMO4P61968 RNU1-136P-201ENST00000384181 164 ntBASIC4.59□□□□□ -1.67
LMO4P61968 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
LMO4P61968 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
LMO4P61968 AC096921.1-201ENST00000411661 375 ntBASIC4.59□□□□□ -1.67
LMO4P61968 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.59□□□□□ -1.67
LMO4P61968 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.59□□□□□ -1.67
LMO4P61968 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LMO4P61968 AL133325.1-201ENST00000421090 382 ntBASIC4.59□□□□□ -1.67
LMO4P61968 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.59□□□□□ -1.67
LMO4P61968 AL139148.1-201ENST00000427122 680 ntBASIC4.59□□□□□ -1.67
LMO4P61968 NANOGP4-201ENST00000427230 913 ntBASIC4.59□□□□□ -1.67
LMO4P61968 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC4.59□□□□□ -1.67
LMO4P61968 MTND4P15-201ENST00000437913 1033 ntBASIC4.59□□□□□ -1.67
LMO4P61968 NANOGP9-201ENST00000439890 892 ntBASIC4.59□□□□□ -1.67
LMO4P61968 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.59□□□□□ -1.67
LMO4P61968 AC092106.1-201ENST00000444291 373 ntBASIC4.59□□□□□ -1.67
LMO4P61968 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.59□□□□□ -1.67
LMO4P61968 AC105399.1-202ENST00000447303 205 ntBASIC4.59□□□□□ -1.67
LMO4P61968 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.59□□□□□ -1.67
LMO4P61968 RPL12P39-201ENST00000455456 496 ntBASIC4.59□□□□□ -1.67
LMO4P61968 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.59□□□□□ -1.67
LMO4P61968 AC079841.1-201ENST00000481228 950 ntBASIC4.59□□□□□ -1.67
LMO4P61968 AC008410.1-201ENST00000483777 339 ntBASIC4.59□□□□□ -1.67
LMO4P61968 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LMO4P61968 AC008953.1-201ENST00000497334 318 ntBASIC4.59□□□□□ -1.67
LMO4P61968 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.59□□□□□ -1.67
LMO4P61968 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms