Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.61□□□□□ -1.51
CLCNKAP51800 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CLCNKAP51800 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.61□□□□□ -1.51
CLCNKAP51800 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.61□□□□□ -1.51
CLCNKAP51800 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.61□□□□□ -1.51
CLCNKAP51800 RN7SL753P-201ENST00000581238 290 ntBASIC5.61□□□□□ -1.51
CLCNKAP51800 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.61□□□□□ -1.51
CLCNKAP51800 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.61□□□□□ -1.51
CLCNKAP51800 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.61□□□□□ -1.51
CLCNKAP51800 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLCNKAP51800 AP000473.2-201ENST00000602659 1537 ntBASIC5.61□□□□□ -1.51
CLCNKAP51800 FO393422.1-201ENST00000603908 708 ntBASIC5.61□□□□□ -1.51
CLCNKAP51800 AC073111.2-201ENST00000605657 1075 ntBASIC5.61□□□□□ -1.51
CLCNKAP51800 AC090607.5-201ENST00000615692 224 ntBASIC5.61□□□□□ -1.51
CLCNKAP51800 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.61□□□□□ -1.51
CLCNKAP51800 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.61□□□□□ -1.51
CLCNKAP51800 AL390318.1-201ENST00000624564 687 ntBASIC5.61□□□□□ -1.51
CLCNKAP51800 AP002512.4-202ENST00000641599 4530 ntBASIC5.61□□□□□ -1.51
CLCNKAP51800 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLCNKAP51800 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CLCNKAP51800 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CLCNKAP51800 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLCNKAP51800 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CLCNKAP51800 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.6□□□□□ -1.51
CLCNKAP51800 MRE11P1-201ENST00000464884 2127 ntBASIC5.6□□□□□ -1.51
CLCNKAP51800 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLCNKAP51800 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLCNKAP51800 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CLCNKAP51800 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLCNKAP51800 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLCNKAP51800 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLCNKAP51800 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLCNKAP51800 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.6□□□□□ -1.51
CLCNKAP51800 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLCNKAP51800 AC092451.3-201ENST00000625067 1343 ntBASIC5.6□□□□□ -1.51
CLCNKAP51800 RNU6-618P-201ENST00000363518 112 ntBASIC5.6□□□□□ -1.51
CLCNKAP51800 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CLCNKAP51800 AL391422.1-201ENST00000402155 436 ntBASIC5.6□□□□□ -1.51
CLCNKAP51800 AL589655.1-201ENST00000405398 482 ntBASIC5.6□□□□□ -1.51
CLCNKAP51800 GAPDHP42-201ENST00000406848 981 ntBASIC5.6□□□□□ -1.51
CLCNKAP51800 AL358178.1-201ENST00000407698 397 ntBASIC5.6□□□□□ -1.51
CLCNKAP51800 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.6□□□□□ -1.51
CLCNKAP51800 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.6□□□□□ -1.51
CLCNKAP51800 RMRPP5-201ENST00000411156 267 ntBASIC5.6□□□□□ -1.51
CLCNKAP51800 RN7SKP279-201ENST00000411383 298 ntBASIC5.6□□□□□ -1.51
CLCNKAP51800 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.6□□□□□ -1.51
CLCNKAP51800 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.6□□□□□ -1.51
CLCNKAP51800 RPL12P43-201ENST00000420608 499 ntBASIC5.6□□□□□ -1.51
CLCNKAP51800 RCC2P2-201ENST00000422174 918 ntBASIC5.6□□□□□ -1.51
CLCNKAP51800 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.6□□□□□ -1.51
CLCNKAP51800 RPL17P35-201ENST00000432217 549 ntBASIC5.6□□□□□ -1.51
CLCNKAP51800 USP24P1-201ENST00000433802 779 ntBASIC5.6□□□□□ -1.51
CLCNKAP51800 AL450996.1-201ENST00000445574 1202 ntBASIC5.6□□□□□ -1.51
CLCNKAP51800 MORF4L1P4-201ENST00000450245 976 ntBASIC5.6□□□□□ -1.51
CLCNKAP51800 YWHAEP1-201ENST00000453697 763 ntBASIC5.6□□□□□ -1.51
CLCNKAP51800 RPS23P2-201ENST00000463671 415 ntBASIC5.6□□□□□ -1.51
CLCNKAP51800 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLCNKAP51800 AC087672.1-201ENST00000479876 766 ntBASIC5.6□□□□□ -1.51
CLCNKAP51800 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.6□□□□□ -1.51
CLCNKAP51800 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.6□□□□□ -1.51
CLCNKAP51800 OR10D4P-201ENST00000525892 951 ntBASIC5.6□□□□□ -1.51
CLCNKAP51800 AC019227.1-201ENST00000526902 510 ntBASIC5.6□□□□□ -1.51
CLCNKAP51800 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.6□□□□□ -1.51
CLCNKAP51800 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.6□□□□□ -1.51
CLCNKAP51800 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.6□□□□□ -1.51
CLCNKAP51800 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.6□□□□□ -1.51
CLCNKAP51800 AL513327.3-201ENST00000602618 469 ntBASIC5.6□□□□□ -1.51
CLCNKAP51800 AC144521.1-201ENST00000607148 956 ntBASIC5.6□□□□□ -1.51
CLCNKAP51800 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLCNKAP51800 AL691477.1-201ENST00000624398 162 ntBASIC5.6□□□□□ -1.51
CLCNKAP51800 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLCNKAP51800 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.6□□□□□ -1.51
CLCNKAP51800 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.6□□□□□ -1.51
CLCNKAP51800 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLCNKAP51800 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.6□□□□□ -1.51
CLCNKAP51800 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLCNKAP51800 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLCNKAP51800 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLCNKAP51800 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLCNKAP51800 SAMM50P1-201ENST00000455403 1399 ntBASIC5.59□□□□□ -1.51
CLCNKAP51800 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.59□□□□□ -1.51
CLCNKAP51800 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CLCNKAP51800 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CLCNKAP51800 AL359955.1-201ENST00000455242 3275 ntBASIC5.59□□□□□ -1.51
CLCNKAP51800 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.59□□□□□ -1.51
CLCNKAP51800 MIR133A2-201ENST00000347538 102 ntBASIC5.59□□□□□ -1.51
CLCNKAP51800 RNA5SP30-201ENST00000365552 115 ntBASIC5.59□□□□□ -1.51
CLCNKAP51800 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLCNKAP51800 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.59□□□□□ -1.51
CLCNKAP51800 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.59□□□□□ -1.51
CLCNKAP51800 AL121776.1-201ENST00000429337 372 ntBASIC5.59□□□□□ -1.51
CLCNKAP51800 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.59□□□□□ -1.51
CLCNKAP51800 SNRPFP2-201ENST00000440710 251 ntBASIC5.59□□□□□ -1.51
CLCNKAP51800 EEF1B2P6-201ENST00000445713 673 ntBASIC5.59□□□□□ -1.51
CLCNKAP51800 AC073909.1-201ENST00000447112 999 ntBASIC5.59□□□□□ -1.51
CLCNKAP51800 MEMO1P4-201ENST00000453590 386 ntBASIC5.59□□□□□ -1.51
CLCNKAP51800 RPSAP39-201ENST00000467439 883 ntBASIC5.59□□□□□ -1.51
CLCNKAP51800 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CLCNKAP51800 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.59□□□□□ -1.51
CLCNKAP51800 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms