Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.52□□□□□ -1.37
LTBRP36941 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.52□□□□□ -1.37
LTBRP36941 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LTBRP36941 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LTBRP36941 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC6.52□□□□□ -1.37
LTBRP36941 RPL12P48-201ENST00000605620 304 ntBASIC6.52□□□□□ -1.37
LTBRP36941 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC6.52□□□□□ -1.37
LTBRP36941 AC139769.3-201ENST00000618383 175 ntBASIC6.52□□□□□ -1.37
LTBRP36941 AL158163.2-201ENST00000619110 700 ntBASIC6.52□□□□□ -1.37
LTBRP36941 AC010435.1-201ENST00000623353 1177 ntBASIC6.52□□□□□ -1.37
LTBRP36941 ZNF663P-202ENST00000641770 1131 ntBASIC6.52□□□□□ -1.37
LTBRP36941 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC6.52□□□□□ -1.37
LTBRP36941 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
LTBRP36941 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
LTBRP36941 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LTBRP36941 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
LTBRP36941 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LTBRP36941 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LTBRP36941 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
LTBRP36941 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.52□□□□□ -1.37
LTBRP36941 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.52□□□□□ -1.37
LTBRP36941 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LTBRP36941 AC117409.1-201ENST00000470499 1310 ntBASIC6.51□□□□□ -1.37
LTBRP36941 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LTBRP36941 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
LTBRP36941 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
LTBRP36941 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
LTBRP36941 VN2R3P-201ENST00000422626 1412 ntBASIC6.51□□□□□ -1.37
LTBRP36941 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LTBRP36941 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC6.51□□□□□ -1.37
LTBRP36941 WDR95P-201ENST00000425638 1542 ntBASIC6.51□□□□□ -1.37
LTBRP36941 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LTBRP36941 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
LTBRP36941 AC005839.1-201ENST00000624148 3213 ntBASIC6.51□□□□□ -1.37
LTBRP36941 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LTBRP36941 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
LTBRP36941 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC6.51□□□□□ -1.37
LTBRP36941 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
LTBRP36941 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
LTBRP36941 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC6.51□□□□□ -1.37
LTBRP36941 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LTBRP36941 SNORA74A-201ENST00000364089 198 ntBASIC6.51□□□□□ -1.37
LTBRP36941 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.51□□□□□ -1.37
LTBRP36941 RNU1-46P-201ENST00000384425 164 ntBASIC6.51□□□□□ -1.37
LTBRP36941 AL121977.1-201ENST00000401636 979 ntBASIC6.51□□□□□ -1.37
LTBRP36941 HMGB3P31-201ENST00000413333 595 ntBASIC6.51□□□□□ -1.37
LTBRP36941 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.51□□□□□ -1.37
LTBRP36941 OR4K6P-201ENST00000416478 897 ntBASIC6.51□□□□□ -1.37
LTBRP36941 TAF13P2-201ENST00000416876 286 ntBASIC6.51□□□□□ -1.37
LTBRP36941 RPL7P53-201ENST00000421245 739 ntBASIC6.51□□□□□ -1.37
LTBRP36941 FO393419.3-201ENST00000428741 282 ntBASIC6.51□□□□□ -1.37
LTBRP36941 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC6.51□□□□□ -1.37
LTBRP36941 GAPDHP58-201ENST00000438477 1006 ntBASIC6.51□□□□□ -1.37
LTBRP36941 ISCA1P2-201ENST00000438679 421 ntBASIC6.51□□□□□ -1.37
LTBRP36941 OSTCP1-201ENST00000455507 450 ntBASIC6.51□□□□□ -1.37
LTBRP36941 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC6.51□□□□□ -1.37
LTBRP36941 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC6.51□□□□□ -1.37
LTBRP36941 AC108043.1-201ENST00000512696 574 ntBASIC6.51□□□□□ -1.37
LTBRP36941 SETP21-201ENST00000514799 892 ntBASIC6.51□□□□□ -1.37
LTBRP36941 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.51□□□□□ -1.37
LTBRP36941 Y_RNA.710-201ENST00000516975 110 ntBASIC6.51□□□□□ -1.37
LTBRP36941 CYCSP22-201ENST00000517555 339 ntBASIC6.51□□□□□ -1.37
LTBRP36941 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.51□□□□□ -1.37
LTBRP36941 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC6.51□□□□□ -1.37
LTBRP36941 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.51□□□□□ -1.37
LTBRP36941 AL049870.4-201ENST00000555741 486 ntBASIC6.51□□□□□ -1.37
LTBRP36941 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.51□□□□□ -1.37
LTBRP36941 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.51□□□□□ -1.37
LTBRP36941 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LTBRP36941 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
LTBRP36941 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.51□□□□□ -1.37
LTBRP36941 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.51□□□□□ -1.37
LTBRP36941 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LTBRP36941 OR2BH1P-201ENST00000608850 864 ntBASIC6.51□□□□□ -1.37
LTBRP36941 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LTBRP36941 MIR193BHG-214ENST00000641765 509 ntBASIC6.51□□□□□ -1.37
LTBRP36941 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC6.51□□□□□ -1.37
LTBRP36941 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LTBRP36941 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC6.51□□□□□ -1.37
LTBRP36941 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LTBRP36941 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
LTBRP36941 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
LTBRP36941 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LTBRP36941 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LTBRP36941 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LTBRP36941 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LTBRP36941 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
LTBRP36941 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LTBRP36941 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
LTBRP36941 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LTBRP36941 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
LTBRP36941 AL139384.2-201ENST00000613809 3590 ntBASIC6.51□□□□□ -1.37
LTBRP36941 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.51□□□□□ -1.37
LTBRP36941 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.5□□□□□ -1.37
LTBRP36941 ZNF542P-204ENST00000482727 1305 ntBASIC6.5□□□□□ -1.37
LTBRP36941 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LTBRP36941 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.5□□□□□ -1.37
LTBRP36941 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
LTBRP36941 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
LTBRP36941 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms