Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC009237.13-201ENST00000603193 276 ntBASIC6.29□□□□□ -1.4
CIITAP33076 AC016542.1-201ENST00000608259 493 ntBASIC6.29□□□□□ -1.4
CIITAP33076 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC6.29□□□□□ -1.4
CIITAP33076 AC104307.1-201ENST00000616142 196 ntBASIC6.29□□□□□ -1.4
CIITAP33076 MIR6886-201ENST00000619864 61 ntBASIC6.29□□□□□ -1.4
CIITAP33076 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
CIITAP33076 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CIITAP33076 AL359955.1-201ENST00000455242 3275 ntBASIC6.29□□□□□ -1.4
CIITAP33076 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.29□□□□□ -1.4
CIITAP33076 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CIITAP33076 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.29□□□□□ -1.4
CIITAP33076 AC068870.1-201ENST00000563737 2455 ntBASIC6.28□□□□□ -1.4
CIITAP33076 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CIITAP33076 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.28□□□□□ -1.4
CIITAP33076 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CIITAP33076 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
CIITAP33076 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.28□□□□□ -1.4
CIITAP33076 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CIITAP33076 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CIITAP33076 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
CIITAP33076 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CIITAP33076 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CIITAP33076 RN7SKP160-201ENST00000363804 340 ntBASIC6.28□□□□□ -1.4
CIITAP33076 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.28□□□□□ -1.4
CIITAP33076 MT-RNR1-201ENST00000389680 954 ntBASIC6.28□□□□□ -1.4
CIITAP33076 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CIITAP33076 OR3A2-201ENST00000408891 1076 ntBASIC6.28□□□□□ -1.4
CIITAP33076 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CIITAP33076 RIMKLBP2-201ENST00000424737 654 ntBASIC6.28□□□□□ -1.4
CIITAP33076 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CIITAP33076 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.28□□□□□ -1.4
CIITAP33076 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CIITAP33076 AC092106.1-201ENST00000444291 373 ntBASIC6.28□□□□□ -1.4
CIITAP33076 AC073072.2-201ENST00000447425 348 ntBASIC6.28□□□□□ -1.4
CIITAP33076 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.28□□□□□ -1.4
CIITAP33076 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CIITAP33076 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.28□□□□□ -1.4
CIITAP33076 RN7SL184P-201ENST00000488308 297 ntBASIC6.28□□□□□ -1.4
CIITAP33076 AC090638.1-201ENST00000498296 909 ntBASIC6.28□□□□□ -1.4
CIITAP33076 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC6.28□□□□□ -1.4
CIITAP33076 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.28□□□□□ -1.4
CIITAP33076 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC6.28□□□□□ -1.4
CIITAP33076 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.28□□□□□ -1.4
CIITAP33076 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.28□□□□□ -1.4
CIITAP33076 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.28□□□□□ -1.4
CIITAP33076 OR8K2P-201ENST00000524645 927 ntBASIC6.28□□□□□ -1.4
CIITAP33076 HNRNPRP2-201ENST00000528421 743 ntBASIC6.28□□□□□ -1.4
CIITAP33076 OR5AM1P-201ENST00000532136 1032 ntBASIC6.28□□□□□ -1.4
CIITAP33076 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC6.28□□□□□ -1.4
CIITAP33076 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.28□□□□□ -1.4
CIITAP33076 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC6.28□□□□□ -1.4
CIITAP33076 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.28□□□□□ -1.4
CIITAP33076 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.28□□□□□ -1.4
CIITAP33076 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.28□□□□□ -1.4
CIITAP33076 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.28□□□□□ -1.4
CIITAP33076 AC007204.2-201ENST00000615022 616 ntBASIC6.28□□□□□ -1.4
CIITAP33076 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CIITAP33076 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CIITAP33076 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
CIITAP33076 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
CIITAP33076 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CIITAP33076 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CIITAP33076 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CIITAP33076 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.28□□□□□ -1.4
CIITAP33076 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CIITAP33076 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CIITAP33076 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.28□□□□□ -1.4
CIITAP33076 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
CIITAP33076 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CIITAP33076 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CIITAP33076 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CIITAP33076 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CIITAP33076 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CIITAP33076 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CIITAP33076 Y_RNA.62-201ENST00000362840 99 ntBASIC6.27□□□□□ -1.41
CIITAP33076 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC6.27□□□□□ -1.41
CIITAP33076 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.27□□□□□ -1.41
CIITAP33076 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.27□□□□□ -1.41
CIITAP33076 AC114878.1-201ENST00000441166 358 ntBASIC6.27□□□□□ -1.41
CIITAP33076 OR2AF1P-201ENST00000454899 889 ntBASIC6.27□□□□□ -1.41
CIITAP33076 CYCSP53-201ENST00000455540 265 ntBASIC6.27□□□□□ -1.41
CIITAP33076 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.27□□□□□ -1.41
CIITAP33076 PPP1R11P1-201ENST00000486095 376 ntBASIC6.27□□□□□ -1.41
CIITAP33076 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC6.27□□□□□ -1.41
CIITAP33076 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.27□□□□□ -1.41
CIITAP33076 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.27□□□□□ -1.41
CIITAP33076 SETP12-201ENST00000514068 805 ntBASIC6.27□□□□□ -1.41
CIITAP33076 ATP5LP3-201ENST00000514223 304 ntBASIC6.27□□□□□ -1.41
CIITAP33076 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.27□□□□□ -1.41
CIITAP33076 OR4A46P-201ENST00000527255 933 ntBASIC6.27□□□□□ -1.41
CIITAP33076 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.27□□□□□ -1.41
CIITAP33076 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC6.27□□□□□ -1.41
CIITAP33076 AC084824.2-201ENST00000548906 345 ntBASIC6.27□□□□□ -1.41
CIITAP33076 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC6.27□□□□□ -1.41
CIITAP33076 HMGN2P47-201ENST00000559378 272 ntBASIC6.27□□□□□ -1.41
CIITAP33076 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.27□□□□□ -1.41
CIITAP33076 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.27□□□□□ -1.41
CIITAP33076 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.27□□□□□ -1.41
CIITAP33076 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC6.27□□□□□ -1.41
CIITAP33076 AC015802.5-201ENST00000607478 399 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms