Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.57□□□□□ -1.68
COL8A2P25067 IGBP1P3-201ENST00000447449 1000 ntBASIC4.57□□□□□ -1.68
COL8A2P25067 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.57□□□□□ -1.68
COL8A2P25067 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.57□□□□□ -1.68
COL8A2P25067 AL035090.1-201ENST00000454835 332 ntBASIC4.57□□□□□ -1.68
COL8A2P25067 SNORD125-201ENST00000459538 96 ntBASIC4.57□□□□□ -1.68
COL8A2P25067 AC005532.2-201ENST00000467154 373 ntBASIC4.57□□□□□ -1.68
COL8A2P25067 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
COL8A2P25067 AC004815.1-201ENST00000484185 331 ntBASIC4.57□□□□□ -1.68
COL8A2P25067 RPS17P5-201ENST00000498293 408 ntBASIC4.57□□□□□ -1.68
COL8A2P25067 AC006499.3-201ENST00000506077 748 ntBASIC4.57□□□□□ -1.68
COL8A2P25067 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.57□□□□□ -1.68
COL8A2P25067 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.57□□□□□ -1.68
COL8A2P25067 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
COL8A2P25067 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.57□□□□□ -1.68
COL8A2P25067 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.57□□□□□ -1.68
COL8A2P25067 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.57□□□□□ -1.68
COL8A2P25067 AC023389.2-201ENST00000580031 955 ntBASIC4.57□□□□□ -1.68
COL8A2P25067 MIR4443-201ENST00000585052 53 ntBASIC4.57□□□□□ -1.68
COL8A2P25067 AL021707.7-201ENST00000607991 416 ntBASIC4.57□□□□□ -1.68
COL8A2P25067 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.57□□□□□ -1.68
COL8A2P25067 AC074101.1-201ENST00000637861 241 ntBASIC4.57□□□□□ -1.68
COL8A2P25067 AC073869.8-201ENST00000641806 335 ntBASIC4.57□□□□□ -1.68
COL8A2P25067 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL8A2P25067 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL8A2P25067 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.57□□□□□ -1.68
COL8A2P25067 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
COL8A2P25067 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL8A2P25067 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL8A2P25067 AC093671.1-201ENST00000624981 2929 ntBASIC4.57□□□□□ -1.68
COL8A2P25067 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL8A2P25067 MRRFP1-201ENST00000435941 1675 ntBASIC4.57□□□□□ -1.68
COL8A2P25067 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
COL8A2P25067 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL8A2P25067 AC011493.1-201ENST00000596753 1632 ntBASIC4.57□□□□□ -1.68
COL8A2P25067 ALB-220ENST00000621628 1606 ntTSL 5 BASIC4.57□□□□□ -1.68
COL8A2P25067 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.57□□□□□ -1.68
COL8A2P25067 AL138820.1-201ENST00000617901 5305 ntBASIC4.57□□□□□ -1.68
COL8A2P25067 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
COL8A2P25067 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.57□□□□□ -1.68
COL8A2P25067 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.57□□□□□ -1.68
COL8A2P25067 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL8A2P25067 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL8A2P25067 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.56□□□□□ -1.68
COL8A2P25067 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
COL8A2P25067 AL442128.2-201ENST00000620246 1824 ntBASIC4.56□□□□□ -1.68
COL8A2P25067 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
COL8A2P25067 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL8A2P25067 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.56□□□□□ -1.68
COL8A2P25067 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL8A2P25067 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
COL8A2P25067 RNU1-43P-201ENST00000365052 165 ntBASIC4.56□□□□□ -1.68
COL8A2P25067 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
COL8A2P25067 RNU1-149P-201ENST00000390870 161 ntBASIC4.56□□□□□ -1.68
COL8A2P25067 RNA5SP339-201ENST00000390987 122 ntBASIC4.56□□□□□ -1.68
COL8A2P25067 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.56□□□□□ -1.68
COL8A2P25067 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.56□□□□□ -1.68
COL8A2P25067 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC4.56□□□□□ -1.68
COL8A2P25067 RPL6P21-201ENST00000418672 846 ntBASIC4.56□□□□□ -1.68
COL8A2P25067 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.56□□□□□ -1.68
COL8A2P25067 MRPS21P2-201ENST00000424704 264 ntBASIC4.56□□□□□ -1.68
COL8A2P25067 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.56□□□□□ -1.68
COL8A2P25067 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.56□□□□□ -1.68
COL8A2P25067 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.56□□□□□ -1.68
COL8A2P25067 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.56□□□□□ -1.68
COL8A2P25067 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL8A2P25067 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.56□□□□□ -1.68
COL8A2P25067 AL672138.1-201ENST00000450604 1015 ntBASIC4.56□□□□□ -1.68
COL8A2P25067 RPS18P6-201ENST00000476880 458 ntBASIC4.56□□□□□ -1.68
COL8A2P25067 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.56□□□□□ -1.68
COL8A2P25067 AC109464.1-201ENST00000511091 819 ntBASIC4.56□□□□□ -1.68
COL8A2P25067 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.56□□□□□ -1.68
COL8A2P25067 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.56□□□□□ -1.68
COL8A2P25067 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.56□□□□□ -1.68
COL8A2P25067 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
COL8A2P25067 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.56□□□□□ -1.68
COL8A2P25067 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.56□□□□□ -1.68
COL8A2P25067 AC044860.2-201ENST00000561005 179 ntBASIC4.56□□□□□ -1.68
COL8A2P25067 RPL10P14-201ENST00000565265 298 ntBASIC4.56□□□□□ -1.68
COL8A2P25067 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.56□□□□□ -1.68
COL8A2P25067 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL8A2P25067 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.56□□□□□ -1.68
COL8A2P25067 AC018445.2-201ENST00000622987 260 ntBASIC4.56□□□□□ -1.68
COL8A2P25067 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.56□□□□□ -1.68
COL8A2P25067 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL8A2P25067 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL8A2P25067 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
COL8A2P25067 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC4.56□□□□□ -1.68
COL8A2P25067 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
COL8A2P25067 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
COL8A2P25067 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
COL8A2P25067 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.55□□□□□ -1.68
COL8A2P25067 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL8A2P25067 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL8A2P25067 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL8A2P25067 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
COL8A2P25067 AC016745.2-201ENST00000608834 3443 ntBASIC4.55□□□□□ -1.68
COL8A2P25067 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL8A2P25067 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.55□□□□□ -1.68
COL8A2P25067 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms