Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC7.47□□□□□ -1.21
LIG1P18858 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC7.47□□□□□ -1.21
LIG1P18858 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.47□□□□□ -1.21
LIG1P18858 BNIP3P30-201ENST00000601184 574 ntBASIC7.47□□□□□ -1.21
LIG1P18858 AC005479.3-201ENST00000602790 431 ntBASIC7.47□□□□□ -1.21
LIG1P18858 AL049840.5-201ENST00000602827 552 ntBASIC7.47□□□□□ -1.21
LIG1P18858 AL020997.3-201ENST00000602843 359 ntBASIC7.47□□□□□ -1.21
LIG1P18858 AL390877.1-201ENST00000605704 214 ntBASIC7.47□□□□□ -1.21
LIG1P18858 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC7.47□□□□□ -1.21
LIG1P18858 RN7SKP299-201ENST00000606679 301 ntBASIC7.47□□□□□ -1.21
LIG1P18858 AC016877.3-201ENST00000606778 504 ntBASIC7.47□□□□□ -1.21
LIG1P18858 AC068944.2-201ENST00000610373 403 ntBASIC7.47□□□□□ -1.21
LIG1P18858 AC091931.1-201ENST00000623488 728 ntBASIC7.47□□□□□ -1.21
LIG1P18858 AP003400.5-201ENST00000624827 617 ntBASIC7.47□□□□□ -1.21
LIG1P18858 AC005609.4-201ENST00000625071 447 ntBASIC7.47□□□□□ -1.21
LIG1P18858 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC7.47□□□□□ -1.21
LIG1P18858 CLUHP10-201ENST00000631979 980 ntBASIC7.47□□□□□ -1.21
LIG1P18858 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC7.47□□□□□ -1.21
LIG1P18858 AL357140.4-201ENST00000636827 412 ntBASIC7.47□□□□□ -1.21
LIG1P18858 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LIG1P18858 TMCC1P1-201ENST00000518897 1980 ntBASIC7.47□□□□□ -1.21
LIG1P18858 MSL3P1-202ENST00000440028 1468 ntBASIC7.47□□□□□ -1.21
LIG1P18858 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LIG1P18858 AKAP17BP-201ENST00000431706 2719 ntBASIC7.47□□□□□ -1.21
LIG1P18858 HSPD1P8-201ENST00000400121 1658 ntBASIC7.47□□□□□ -1.21
LIG1P18858 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC7.47□□□□□ -1.21
LIG1P18858 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
LIG1P18858 AC009779.8-201ENST00000641684 4384 ntBASIC7.47□□□□□ -1.21
LIG1P18858 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC7.47□□□□□ -1.21
LIG1P18858 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC7.47□□□□□ -1.21
LIG1P18858 AC010132.4-201ENST00000569883 1368 ntBASIC7.46□□□□□ -1.21
LIG1P18858 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
LIG1P18858 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC7.46□□□□□ -1.21
LIG1P18858 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
LIG1P18858 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
LIG1P18858 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
LIG1P18858 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
LIG1P18858 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
LIG1P18858 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC7.46□□□□□ -1.22
LIG1P18858 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC7.46□□□□□ -1.22
LIG1P18858 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC7.46□□□□□ -1.22
LIG1P18858 RPL23AP85-201ENST00000421838 433 ntBASIC7.46□□□□□ -1.22
LIG1P18858 ELOCP8-201ENST00000439309 332 ntBASIC7.46□□□□□ -1.22
LIG1P18858 E2F6P3-201ENST00000441743 743 ntBASIC7.46□□□□□ -1.22
LIG1P18858 ELOCP15-201ENST00000442090 332 ntBASIC7.46□□□□□ -1.22
LIG1P18858 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC7.46□□□□□ -1.22
LIG1P18858 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.46□□□□□ -1.22
LIG1P18858 RPL26P30-201ENST00000453533 435 ntBASIC7.46□□□□□ -1.22
LIG1P18858 SRRM1P2-201ENST00000464531 1192 ntBASIC7.46□□□□□ -1.22
LIG1P18858 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
LIG1P18858 AC022336.1-201ENST00000475510 337 ntBASIC7.46□□□□□ -1.22
LIG1P18858 AC091849.1-201ENST00000509920 121 ntBASIC7.46□□□□□ -1.22
LIG1P18858 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC7.46□□□□□ -1.22
LIG1P18858 RNU6-232P-201ENST00000517144 64 ntBASIC7.46□□□□□ -1.22
LIG1P18858 TMEM97P2-201ENST00000517841 403 ntBASIC7.46□□□□□ -1.22
LIG1P18858 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC7.46□□□□□ -1.22
LIG1P18858 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC7.46□□□□□ -1.22
LIG1P18858 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC7.46□□□□□ -1.22
LIG1P18858 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.46□□□□□ -1.22
LIG1P18858 AC002400.1-201ENST00000569310 726 ntBASIC7.46□□□□□ -1.22
LIG1P18858 AC010547.7-201ENST00000570323 333 ntBASIC7.46□□□□□ -1.22
LIG1P18858 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC7.46□□□□□ -1.22
LIG1P18858 AC022069.1-201ENST00000582910 658 ntBASIC7.46□□□□□ -1.22
LIG1P18858 VN1R88P-201ENST00000596787 292 ntBASIC7.46□□□□□ -1.22
LIG1P18858 DUXAP11-201ENST00000603858 526 ntBASIC7.46□□□□□ -1.22
LIG1P18858 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC7.46□□□□□ -1.22
LIG1P18858 AC024257.5-201ENST00000612739 531 ntBASIC7.46□□□□□ -1.22
LIG1P18858 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.46□□□□□ -1.22
LIG1P18858 AC018755.4-201ENST00000619715 454 ntBASIC7.46□□□□□ -1.22
LIG1P18858 AP001264.1-201ENST00000620602 703 ntBASIC7.46□□□□□ -1.22
LIG1P18858 MRPL57P1-201ENST00000621486 265 ntBASIC7.46□□□□□ -1.22
LIG1P18858 AC005514.1-201ENST00000623521 208 ntBASIC7.46□□□□□ -1.22
LIG1P18858 AC010608.2-201ENST00000624830 470 ntBASIC7.46□□□□□ -1.22
LIG1P18858 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC7.46□□□□□ -1.22
LIG1P18858 AC099654.13-201ENST00000639774 207 ntBASIC7.46□□□□□ -1.22
LIG1P18858 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.22
LIG1P18858 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
LIG1P18858 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.46□□□□□ -1.22
LIG1P18858 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
LIG1P18858 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
LIG1P18858 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.22
LIG1P18858 AC011503.2-201ENST00000594230 1500 ntBASIC7.46□□□□□ -1.22
LIG1P18858 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
LIG1P18858 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
LIG1P18858 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
LIG1P18858 AC092451.3-201ENST00000625067 1343 ntBASIC7.46□□□□□ -1.22
LIG1P18858 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
LIG1P18858 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
LIG1P18858 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.46□□□□□ -1.22
LIG1P18858 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.46□□□□□ -1.22
LIG1P18858 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.46□□□□□ -1.22
LIG1P18858 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
LIG1P18858 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC7.46□□□□□ -1.22
LIG1P18858 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.45□□□□□ -1.22
LIG1P18858 AC027514.1-201ENST00000588561 1603 ntBASIC7.45□□□□□ -1.22
LIG1P18858 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.45□□□□□ -1.22
LIG1P18858 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.45□□□□□ -1.22
LIG1P18858 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.45□□□□□ -1.22
LIG1P18858 AC092104.1-201ENST00000497346 1441 ntBASIC7.45□□□□□ -1.22
LIG1P18858 AC093297.3-201ENST00000607056 2517 ntBASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms