Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC090287.1-201ENST00000578374 291 ntBASIC6.19□□□□□ -1.42
ATF4P18848 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC6.19□□□□□ -1.42
ATF4P18848 AC139085.1-201ENST00000582716 182 ntBASIC6.19□□□□□ -1.42
ATF4P18848 AC005828.5-201ENST00000582741 355 ntTSL 4 BASIC6.19□□□□□ -1.42
ATF4P18848 AC009955.2-201ENST00000597288 542 ntBASIC6.19□□□□□ -1.42
ATF4P18848 AL021997.1-201ENST00000605757 193 ntBASIC6.19□□□□□ -1.42
ATF4P18848 AC016876.3-201ENST00000610459 426 ntBASIC6.19□□□□□ -1.42
ATF4P18848 AL731556.2-201ENST00000615610 770 ntBASIC6.19□□□□□ -1.42
ATF4P18848 U1.41-201ENST00000617626 165 ntBASIC6.19□□□□□ -1.42
ATF4P18848 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATF4P18848 AL049536.1-201ENST00000625043 744 ntBASIC6.19□□□□□ -1.42
ATF4P18848 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.19□□□□□ -1.42
ATF4P18848 PCDH18-205ENST00000511115 1331 ntTSL 2 BASIC6.19□□□□□ -1.42
ATF4P18848 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.19□□□□□ -1.42
ATF4P18848 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ATF4P18848 LINC00955-202ENST00000514422 1502 ntTSL 4 BASIC6.19□□□□□ -1.42
ATF4P18848 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATF4P18848 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ATF4P18848 PIK3C3-204ENST00000586545 1554 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ATF4P18848 AP000756.2-201ENST00000624168 2567 ntBASIC6.18□□□□□ -1.42
ATF4P18848 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC6.18□□□□□ -1.42
ATF4P18848 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.18□□□□□ -1.42
ATF4P18848 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
ATF4P18848 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ATF4P18848 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
ATF4P18848 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ATF4P18848 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
ATF4P18848 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC6.18□□□□□ -1.42
ATF4P18848 AC114786.1-201ENST00000512892 1415 ntBASIC6.18□□□□□ -1.42
ATF4P18848 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ATF4P18848 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
ATF4P18848 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
ATF4P18848 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.18□□□□□ -1.42
ATF4P18848 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ATF4P18848 PCBP1-AS1-243ENST00000458698 1893 ntTSL 3 BASIC6.18□□□□□ -1.42
ATF4P18848 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ATF4P18848 HSPD1P8-201ENST00000400121 1658 ntBASIC6.18□□□□□ -1.42
ATF4P18848 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ATF4P18848 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
ATF4P18848 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ATF4P18848 IFT43-201ENST00000238628 816 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ATF4P18848 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ATF4P18848 ADGRF2-201ENST00000296862 2127 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ATF4P18848 RNA5SP336-201ENST00000364189 117 ntBASIC6.18□□□□□ -1.42
ATF4P18848 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC6.18□□□□□ -1.42
ATF4P18848 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
ATF4P18848 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
ATF4P18848 RNU1-74P-201ENST00000384108 171 ntBASIC6.18□□□□□ -1.42
ATF4P18848 RNU6-1215P-201ENST00000384441 102 ntBASIC6.18□□□□□ -1.42
ATF4P18848 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
ATF4P18848 RNU1-149P-201ENST00000390870 161 ntBASIC6.18□□□□□ -1.42
ATF4P18848 AL050335.1-201ENST00000396909 869 ntBASIC6.18□□□□□ -1.42
ATF4P18848 AL078604.1-201ENST00000404609 466 ntBASIC6.18□□□□□ -1.42
ATF4P18848 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
ATF4P18848 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC6.18□□□□□ -1.42
ATF4P18848 HMGB1P11-201ENST00000413899 637 ntBASIC6.18□□□□□ -1.42
ATF4P18848 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.18□□□□□ -1.42
ATF4P18848 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC6.18□□□□□ -1.42
ATF4P18848 AL389915.1-201ENST00000422463 466 ntBASIC6.18□□□□□ -1.42
ATF4P18848 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC6.18□□□□□ -1.42
ATF4P18848 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.18□□□□□ -1.42
ATF4P18848 AL031736.2-201ENST00000426573 787 ntBASIC6.18□□□□□ -1.42
ATF4P18848 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.18□□□□□ -1.42
ATF4P18848 GAS5-211ENST00000432536 959 ntTSL 2 BASIC6.18□□□□□ -1.42
ATF4P18848 CYP4F26P-202ENST00000433357 852 ntTSL 5 BASIC6.18□□□□□ -1.42
ATF4P18848 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.18□□□□□ -1.42
ATF4P18848 NDUFS5P5-201ENST00000437256 321 ntBASIC6.18□□□□□ -1.42
ATF4P18848 FDPSP8-201ENST00000438304 1089 ntBASIC6.18□□□□□ -1.42
ATF4P18848 UBE2V1P3-201ENST00000439651 417 ntBASIC6.18□□□□□ -1.42
ATF4P18848 AL359711.1-201ENST00000441999 123 ntBASIC6.18□□□□□ -1.42
ATF4P18848 LINC00572-201ENST00000450264 575 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ATF4P18848 HMGB1P7-201ENST00000450921 612 ntBASIC6.18□□□□□ -1.42
ATF4P18848 AL021154.1-201ENST00000451217 456 ntTSL 3 BASIC6.18□□□□□ -1.42
ATF4P18848 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC6.18□□□□□ -1.42
ATF4P18848 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC6.18□□□□□ -1.42
ATF4P18848 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ATF4P18848 AC097493.1-201ENST00000463958 372 ntBASIC6.18□□□□□ -1.42
ATF4P18848 AC092757.1-201ENST00000467293 467 ntBASIC6.18□□□□□ -1.42
ATF4P18848 AC090638.1-201ENST00000498296 909 ntBASIC6.18□□□□□ -1.42
ATF4P18848 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.18□□□□□ -1.42
ATF4P18848 OR10J9P-201ENST00000511932 987 ntBASIC6.18□□□□□ -1.42
ATF4P18848 LINC02021-203ENST00000514145 569 ntTSL 4 BASIC6.18□□□□□ -1.42
ATF4P18848 SNRPCP8-201ENST00000514820 211 ntBASIC6.18□□□□□ -1.42
ATF4P18848 RNA5SP422-201ENST00000516778 111 ntBASIC6.18□□□□□ -1.42
ATF4P18848 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC6.18□□□□□ -1.42
ATF4P18848 AC090193.2-201ENST00000518970 537 ntTSL 4 BASIC6.18□□□□□ -1.42
ATF4P18848 OR5M2P-201ENST00000529003 936 ntBASIC6.18□□□□□ -1.42
ATF4P18848 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.18□□□□□ -1.42
ATF4P18848 AC027026.1-201ENST00000532323 742 ntBASIC6.18□□□□□ -1.42
ATF4P18848 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC6.18□□□□□ -1.42
ATF4P18848 TMEM269-202ENST00000536543 983 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
ATF4P18848 AC137767.1-202ENST00000543072 752 ntTSL 2 BASIC6.18□□□□□ -1.42
ATF4P18848 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC6.18□□□□□ -1.42
ATF4P18848 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC6.18□□□□□ -1.42
ATF4P18848 SULT1C2P1-202ENST00000562418 459 ntBASIC6.18□□□□□ -1.42
ATF4P18848 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC6.18□□□□□ -1.42
ATF4P18848 AC022558.2-201ENST00000566841 754 ntTSL 5 BASIC6.18□□□□□ -1.42
ATF4P18848 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.18□□□□□ -1.42
ATF4P18848 MIR4301-201ENST00000577203 66 ntBASIC6.18□□□□□ -1.42
ATF4P18848 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms