Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
HMGA1P17096 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
HMGA1P17096 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.5□□□□□ -1.53
HMGA1P17096 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HMGA1P17096 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMGA1P17096 SNX18P3-202ENST00000565670 1750 ntBASIC5.5□□□□□ -1.53
HMGA1P17096 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMGA1P17096 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HMGA1P17096 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMGA1P17096 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
HMGA1P17096 AC112255.1-201ENST00000624070 2493 ntBASIC5.49□□□□□ -1.53
HMGA1P17096 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HMGA1P17096 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HMGA1P17096 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMGA1P17096 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMGA1P17096 RNA5SP90-201ENST00000364801 99 ntBASIC5.49□□□□□ -1.53
HMGA1P17096 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMGA1P17096 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.49□□□□□ -1.53
HMGA1P17096 RBMY2QP-201ENST00000429799 1147 ntBASIC5.49□□□□□ -1.53
HMGA1P17096 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.49□□□□□ -1.53
HMGA1P17096 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.49□□□□□ -1.53
HMGA1P17096 AC092647.3-201ENST00000443044 633 ntBASIC5.49□□□□□ -1.53
HMGA1P17096 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.49□□□□□ -1.53
HMGA1P17096 RPL35AP28-201ENST00000459730 331 ntBASIC5.49□□□□□ -1.53
HMGA1P17096 AC097484.1-201ENST00000471148 389 ntBASIC5.49□□□□□ -1.53
HMGA1P17096 AC004980.4-201ENST00000513375 203 ntBASIC5.49□□□□□ -1.53
HMGA1P17096 RN7SKP147-201ENST00000517154 244 ntBASIC5.49□□□□□ -1.53
HMGA1P17096 AC012400.1-201ENST00000518452 381 ntBASIC5.49□□□□□ -1.53
HMGA1P17096 OR5AZ1P-201ENST00000527448 943 ntBASIC5.49□□□□□ -1.53
HMGA1P17096 OR5D15P-201ENST00000531671 942 ntBASIC5.49□□□□□ -1.53
HMGA1P17096 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.49□□□□□ -1.53
HMGA1P17096 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HMGA1P17096 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.49□□□□□ -1.53
HMGA1P17096 MIR4436B2-201ENST00000581415 91 ntBASIC5.49□□□□□ -1.53
HMGA1P17096 SETP3-201ENST00000581726 813 ntBASIC5.49□□□□□ -1.53
HMGA1P17096 MIR4436B1-201ENST00000583272 91 ntBASIC5.49□□□□□ -1.53
HMGA1P17096 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.49□□□□□ -1.53
HMGA1P17096 AC008814.1-201ENST00000603797 406 ntBASIC5.49□□□□□ -1.53
HMGA1P17096 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.49□□□□□ -1.53
HMGA1P17096 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMGA1P17096 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HMGA1P17096 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMGA1P17096 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC5.49□□□□□ -1.53
HMGA1P17096 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMGA1P17096 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HMGA1P17096 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMGA1P17096 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.48□□□□□ -1.53
HMGA1P17096 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGA1P17096 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGA1P17096 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
HMGA1P17096 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC5.48□□□□□ -1.53
HMGA1P17096 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGA1P17096 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGA1P17096 RN7SKP104-201ENST00000362605 328 ntBASIC5.48□□□□□ -1.53
HMGA1P17096 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
HMGA1P17096 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.48□□□□□ -1.53
HMGA1P17096 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
HMGA1P17096 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.48□□□□□ -1.53
HMGA1P17096 RBMY2KP-201ENST00000418221 992 ntBASIC5.48□□□□□ -1.53
HMGA1P17096 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGA1P17096 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMGA1P17096 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGA1P17096 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMGA1P17096 PA2G4P6-201ENST00000438325 1197 ntBASIC5.48□□□□□ -1.53
HMGA1P17096 AL645937.3-201ENST00000453647 936 ntBASIC5.48□□□□□ -1.53
HMGA1P17096 AC115223.1-201ENST00000466377 870 ntBASIC5.48□□□□□ -1.53
HMGA1P17096 IGBP1P4-201ENST00000503202 879 ntBASIC5.48□□□□□ -1.53
HMGA1P17096 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGA1P17096 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.48□□□□□ -1.53
HMGA1P17096 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGA1P17096 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGA1P17096 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGA1P17096 AP005131.7-201ENST00000610087 611 ntBASIC5.48□□□□□ -1.53
HMGA1P17096 Mico1.1-201ENST00000611698 204 ntBASIC5.48□□□□□ -1.53
HMGA1P17096 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGA1P17096 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMGA1P17096 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
HMGA1P17096 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGA1P17096 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGA1P17096 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGA1P17096 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMGA1P17096 THAP12P4-201ENST00000528321 2266 ntBASIC5.48□□□□□ -1.53
HMGA1P17096 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMGA1P17096 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
HMGA1P17096 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
HMGA1P17096 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGA1P17096 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGA1P17096 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
HMGA1P17096 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.47□□□□□ -1.53
HMGA1P17096 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.47□□□□□ -1.53
HMGA1P17096 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.47□□□□□ -1.53
HMGA1P17096 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
HMGA1P17096 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.47□□□□□ -1.53
HMGA1P17096 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGA1P17096 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HMGA1P17096 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGA1P17096 AC103591.2-201ENST00000265259 766 ntBASIC5.47□□□□□ -1.53
HMGA1P17096 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.47□□□□□ -1.53
HMGA1P17096 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.47□□□□□ -1.53
HMGA1P17096 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms