Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDGFRAP16234 MTND3P6-201ENST00000485242 339 ntBASIC5.84□□□□□ -1.47
PDGFRAP16234 OR52A4P-203ENST00000498233 1014 ntBASIC5.84□□□□□ -1.47
PDGFRAP16234 AC074087.1-201ENST00000512059 724 ntBASIC5.84□□□□□ -1.47
PDGFRAP16234 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.84□□□□□ -1.47
PDGFRAP16234 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.84□□□□□ -1.47
PDGFRAP16234 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDGFRAP16234 RN7SL753P-201ENST00000581238 290 ntBASIC5.84□□□□□ -1.47
PDGFRAP16234 FO393422.1-201ENST00000603908 708 ntBASIC5.84□□□□□ -1.47
PDGFRAP16234 QTRT1P1-201ENST00000604344 1078 ntBASIC5.84□□□□□ -1.47
PDGFRAP16234 AC117490.2-201ENST00000610042 594 ntBASIC5.84□□□□□ -1.47
PDGFRAP16234 Z95327.3-201ENST00000610385 572 ntBASIC5.84□□□□□ -1.47
PDGFRAP16234 AC025574.2-201ENST00000615621 514 ntBASIC5.84□□□□□ -1.47
PDGFRAP16234 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.84□□□□□ -1.47
PDGFRAP16234 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDGFRAP16234 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
PDGFRAP16234 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDGFRAP16234 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.84□□□□□ -1.47
PDGFRAP16234 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.84□□□□□ -1.47
PDGFRAP16234 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDGFRAP16234 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDGFRAP16234 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
PDGFRAP16234 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
PDGFRAP16234 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFRAP16234 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.83□□□□□ -1.48
PDGFRAP16234 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFRAP16234 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFRAP16234 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFRAP16234 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFRAP16234 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFRAP16234 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFRAP16234 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
PDGFRAP16234 RNA5SP453-201ENST00000362503 119 ntBASIC5.83□□□□□ -1.48
PDGFRAP16234 RNU4-23P-201ENST00000362839 140 ntBASIC5.83□□□□□ -1.48
PDGFRAP16234 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.83□□□□□ -1.48
PDGFRAP16234 GAPDHP42-201ENST00000406848 981 ntBASIC5.83□□□□□ -1.48
PDGFRAP16234 AL596448.1-201ENST00000415024 392 ntBASIC5.83□□□□□ -1.48
PDGFRAP16234 BMS1P17-202ENST00000416720 316 ntBASIC5.83□□□□□ -1.48
PDGFRAP16234 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.83□□□□□ -1.48
PDGFRAP16234 AL034379.1-201ENST00000423216 253 ntBASIC5.83□□□□□ -1.48
PDGFRAP16234 RIMKLBP2-201ENST00000424737 654 ntBASIC5.83□□□□□ -1.48
PDGFRAP16234 RPL7P56-201ENST00000429441 717 ntBASIC5.83□□□□□ -1.48
PDGFRAP16234 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.83□□□□□ -1.48
PDGFRAP16234 AC099670.2-201ENST00000435130 321 ntBASIC5.83□□□□□ -1.48
PDGFRAP16234 FMO7P-201ENST00000436045 768 ntBASIC5.83□□□□□ -1.48
PDGFRAP16234 AC073909.1-201ENST00000447112 999 ntBASIC5.83□□□□□ -1.48
PDGFRAP16234 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.83□□□□□ -1.48
PDGFRAP16234 AL356390.1-201ENST00000455684 397 ntBASIC5.83□□□□□ -1.48
PDGFRAP16234 AC018638.3-201ENST00000461273 132 ntBASIC5.83□□□□□ -1.48
PDGFRAP16234 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.83□□□□□ -1.48
PDGFRAP16234 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.83□□□□□ -1.48
PDGFRAP16234 RFPL4AP3-201ENST00000515267 345 ntBASIC5.83□□□□□ -1.48
PDGFRAP16234 RNU6-751P-201ENST00000516382 101 ntBASIC5.83□□□□□ -1.48
PDGFRAP16234 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.83□□□□□ -1.48
PDGFRAP16234 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFRAP16234 AC104695.2-201ENST00000605056 775 ntBASIC5.83□□□□□ -1.48
PDGFRAP16234 AL049767.1-202ENST00000637826 242 ntBASIC5.83□□□□□ -1.48
PDGFRAP16234 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFRAP16234 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
PDGFRAP16234 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFRAP16234 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.83□□□□□ -1.48
PDGFRAP16234 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
PDGFRAP16234 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFRAP16234 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.82□□□□□ -1.48
PDGFRAP16234 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFRAP16234 AC087516.1-201ENST00000561236 2428 ntBASIC5.82□□□□□ -1.48
PDGFRAP16234 RN7SKP293-201ENST00000411389 296 ntBASIC5.82□□□□□ -1.48
PDGFRAP16234 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.82□□□□□ -1.48
PDGFRAP16234 RPSAP35-201ENST00000413753 818 ntBASIC5.82□□□□□ -1.48
PDGFRAP16234 AC007161.1-204ENST00000423039 460 ntBASIC5.82□□□□□ -1.48
PDGFRAP16234 TNPO1P1-201ENST00000423641 1138 ntBASIC5.82□□□□□ -1.48
PDGFRAP16234 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFRAP16234 IGBP1P3-201ENST00000447449 1000 ntBASIC5.82□□□□□ -1.48
PDGFRAP16234 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
PDGFRAP16234 VDAC2P4-201ENST00000452925 711 ntBASIC5.82□□□□□ -1.48
PDGFRAP16234 AZGP1P2-201ENST00000454506 345 ntBASIC5.82□□□□□ -1.48
PDGFRAP16234 LDHBP2-201ENST00000456969 1005 ntBASIC5.82□□□□□ -1.48
PDGFRAP16234 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.82□□□□□ -1.48
PDGFRAP16234 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFRAP16234 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.82□□□□□ -1.48
PDGFRAP16234 RNA5SP362-201ENST00000516048 118 ntBASIC5.82□□□□□ -1.48
PDGFRAP16234 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.82□□□□□ -1.48
PDGFRAP16234 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.82□□□□□ -1.48
PDGFRAP16234 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.82□□□□□ -1.48
PDGFRAP16234 MRPS21P7-201ENST00000566937 238 ntBASIC5.82□□□□□ -1.48
PDGFRAP16234 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.82□□□□□ -1.48
PDGFRAP16234 AL391597.1-201ENST00000618707 694 ntBASIC5.82□□□□□ -1.48
PDGFRAP16234 CU639417.4-201ENST00000623928 207 ntBASIC5.82□□□□□ -1.48
PDGFRAP16234 AL691477.1-201ENST00000624398 162 ntBASIC5.82□□□□□ -1.48
PDGFRAP16234 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.82□□□□□ -1.48
PDGFRAP16234 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.82□□□□□ -1.48
PDGFRAP16234 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
PDGFRAP16234 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.82□□□□□ -1.48
PDGFRAP16234 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFRAP16234 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFRAP16234 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PDGFRAP16234 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFRAP16234 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFRAP16234 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PDGFRAP16234 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms