Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TOP2AP11388 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
TOP2AP11388 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TOP2AP11388 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC9.1□□□□□ -0.95
TOP2AP11388 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC9.1□□□□□ -0.95
TOP2AP11388 AC092905.1-201ENST00000467527 949 ntBASIC9.1□□□□□ -0.95
TOP2AP11388 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TOP2AP11388 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC9.1□□□□□ -0.95
TOP2AP11388 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC9.1□□□□□ -0.95
TOP2AP11388 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC9.1□□□□□ -0.95
TOP2AP11388 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
TOP2AP11388 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TOP2AP11388 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
TOP2AP11388 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TOP2AP11388 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TOP2AP11388 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC9.09□□□□□ -0.95
TOP2AP11388 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC9.09□□□□□ -0.95
TOP2AP11388 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
TOP2AP11388 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TOP2AP11388 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
TOP2AP11388 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC9.09□□□□□ -0.95
TOP2AP11388 AC068538.1-201ENST00000376856 336 ntBASIC9.09□□□□□ -0.95
TOP2AP11388 SNORA77-201ENST00000408716 125 ntBASIC9.09□□□□□ -0.95
TOP2AP11388 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC9.09□□□□□ -0.95
TOP2AP11388 AC119751.6-201ENST00000416712 186 ntBASIC9.09□□□□□ -0.95
TOP2AP11388 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC9.09□□□□□ -0.95
TOP2AP11388 AL359265.2-201ENST00000434367 631 ntBASIC9.09□□□□□ -0.95
TOP2AP11388 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC9.09□□□□□ -0.95
TOP2AP11388 RPS24P16-201ENST00000497294 392 ntBASIC9.09□□□□□ -0.95
TOP2AP11388 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC9.09□□□□□ -0.95
TOP2AP11388 AP006289.1-201ENST00000538089 277 ntBASIC9.09□□□□□ -0.95
TOP2AP11388 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC9.09□□□□□ -0.95
TOP2AP11388 ZNRD1ASP-221ENST00000637794 1074 ntBASIC9.09□□□□□ -0.95
TOP2AP11388 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
TOP2AP11388 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
TOP2AP11388 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC9.09□□□□□ -0.95
TOP2AP11388 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC9.09□□□□□ -0.95
TOP2AP11388 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC9.09□□□□□ -0.95
TOP2AP11388 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC9.08□□□□□ -0.96
TOP2AP11388 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TOP2AP11388 KYNUP3-201ENST00000574386 1341 ntBASIC9.08□□□□□ -0.96
TOP2AP11388 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TOP2AP11388 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
TOP2AP11388 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC9.08□□□□□ -0.96
TOP2AP11388 HSPD1P12-201ENST00000429127 1069 ntBASIC9.08□□□□□ -0.96
TOP2AP11388 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
TOP2AP11388 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC9.08□□□□□ -0.96
TOP2AP11388 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC9.08□□□□□ -0.96
TOP2AP11388 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC9.08□□□□□ -0.96
TOP2AP11388 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC9.08□□□□□ -0.96
TOP2AP11388 AC083809.1-201ENST00000615051 472 ntBASIC9.08□□□□□ -0.96
TOP2AP11388 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC9.08□□□□□ -0.96
TOP2AP11388 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
TOP2AP11388 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
TOP2AP11388 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
TOP2AP11388 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC9.08□□□□□ -0.96
TOP2AP11388 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TOP2AP11388 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC9.08□□□□□ -0.96
TOP2AP11388 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC9.07□□□□□ -0.96
TOP2AP11388 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
TOP2AP11388 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
TOP2AP11388 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
TOP2AP11388 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC9.07□□□□□ -0.96
TOP2AP11388 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TOP2AP11388 OR9G4-201ENST00000302957 984 ntBASIC9.07□□□□□ -0.96
TOP2AP11388 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
TOP2AP11388 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TOP2AP11388 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC9.07□□□□□ -0.96
TOP2AP11388 CYCSP42-201ENST00000450823 238 ntBASIC9.07□□□□□ -0.96
TOP2AP11388 IGHV5-78-201ENST00000450948 295 ntBASIC9.07□□□□□ -0.96
TOP2AP11388 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC9.07□□□□□ -0.96
TOP2AP11388 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC9.07□□□□□ -0.96
TOP2AP11388 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
TOP2AP11388 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC9.07□□□□□ -0.96
TOP2AP11388 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC9.07□□□□□ -0.96
TOP2AP11388 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC9.07□□□□□ -0.96
TOP2AP11388 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TOP2AP11388 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
TOP2AP11388 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC9.07□□□□□ -0.96
TOP2AP11388 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
TOP2AP11388 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TOP2AP11388 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
TOP2AP11388 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
TOP2AP11388 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC9.06□□□□□ -0.96
TOP2AP11388 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
TOP2AP11388 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
TOP2AP11388 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TOP2AP11388 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC9.06□□□□□ -0.96
TOP2AP11388 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC9.06□□□□□ -0.96
TOP2AP11388 TAAR4P-201ENST00000454843 1039 ntBASIC9.06□□□□□ -0.96
TOP2AP11388 RPL23AP72-201ENST00000492447 435 ntBASIC9.06□□□□□ -0.96
TOP2AP11388 AL512782.1-201ENST00000603093 364 ntBASIC9.06□□□□□ -0.96
TOP2AP11388 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC9.06□□□□□ -0.96
TOP2AP11388 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
TOP2AP11388 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
TOP2AP11388 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
TOP2AP11388 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC9.06□□□□□ -0.96
TOP2AP11388 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
TOP2AP11388 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC9.06□□□□□ -0.96
TOP2AP11388 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC9.06□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms